Thiothrix winogradskyi: L2Y54_14035
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Entry
L2Y54_14035 CDS
T08347
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
twn
Thiothrix winogradskyi
Pathway
twn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
twn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L2Y54_14035 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twn03400
]
L2Y54_14035 (recD)
Enzymes [BR:
twn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
L2Y54_14035 (recD)
DNA repair and recombination proteins [BR:
twn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L2Y54_14035 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
SH3_13
NAT10_TcmA_helicase
SLFN-g3_helicase
AAA_22
nSTAND3
AAA_16
UvrD_C
AAA_28
AAA_7
DEAD
ATPase
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
UJS23058
UniProt:
A0ABY3SV63
LinkDB
All DBs
Position
complement(2770330..2771904)
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AA seq
524 aa
AA seq
DB search
MLLAPPVSHPLDEQLASLLKRLDGSTQARDLAAVVRQVSAHTRDGVIAVPRVALPEVDWE
ALLHSPVVGREGDYKPLIVSDTHVWLYRYWHYEQRLAECIQTRMRDDTLMIISGGPGTGK
TTRVTRLLADFISSGVTPARILLAAPTGKAAMRMQESIRHTRQRENITCAMPEQSSTLHR
LLGFIPNRVGFRHGVHNPLAADVVIVDEASMIDISLMTHLFEAVPPSAKLILLGDKDQLA
SVETGSIFRDLCSGEALAAQMTLLQTSYRFNEADGVGQLAQAIREADEARLLAVLASTEF
ADVTLDESSAGLDAAWLRDGWQDYIAAVNGGAVEAIFNAFNALRILTPLRQGRQGVETLN
GWVDGVMQRVLPTQAGAQRPWYVGRPVMVTQNDYRQNLFNGDIGIALPDVNGDLRVWFPM
GEAGNYRAIAPIRLPAHETAWAMTIHKSQGSEFTRVLLVLPEMDDLPLLGRELLYTAVTR
AKQGIHILASRATLGRALRQVTPPASQLQARLGAYIFTGRGDVT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgctgttagcgccaccggtttcgcacccactcgatgagcagcttgccagtttgctgaaa
cgcttggacggcagcactcaggcgcgtgacctagcagcggtggtgcggcaagtgagtgcg
catactcgcgatggcgtgattgccgtgccgcgtgtcgcgttgccggaagtggattgggaa
gccttgctgcactctcccgtcgtagggcgggagggcgattacaaacccttgattgtgagc
gatacccatgtctggctgtatcgctattggcattatgaacagcgcttggcggaatgcatt
caaacgcggatgcgtgatgacacgctgatgattatttccgggggaccggggacaggtaaa
accaccagagtgacgcgccttctggcagatttcattagcagtggggtgacaccagcgcgg
attttgctggcagcaccgacgggcaaagccgccatgcgaatgcaggagtcgattcgccac
acccgtcagcgcgaaaacattacgtgcgcaatgccggagcaatccagcaccttgcaccgt
ttgctgggtttcatccccaatcgggtcgggtttcggcacggggtgcataaccccttggca
gccgatgtggtaattgtggatgaagcgtcgatgatcgacatttccttaatgacacatttg
tttgaagccgtgccgccgtcagccaagctgattttgctgggcgataaggatcaattggcg
tcggtggaaacggggtcgattttccgcgatttgtgcagtggggaggcgttagccgcgcag
atgacgctgttgcaaaccagctaccgtttcaacgaggcggatggcgtggggcaattggcg
caggcgattcgtgaggcggatgaagcgcggttgttggcggtgttggcttccaccgagttt
gctgacgtgaccttggatgaatcgtcagcgggattggatgcggcgtggttacgtgatggc
tggcaggattatatcgcagcggttaacggcggcgcggtcgaggcgattttcaacgcattt
aatgcgctgcgtattctgacaccgttgcggcaagggcggcagggtgttgaaaccctgaat
ggttgggtcgatggggtgatgcagcgggtattgcctacccaagcgggagcacaacgccct
tggtacgtggggcggcctgttatggtgacgcaaaacgattaccgccagaatttgttcaac
ggtgatattgggattgccttgccggatgtcaacggtgatttacgggtgtggtttccgatg
ggggaggcggggaattaccgtgcaattgcaccgatccgtttgcctgcgcatgaaaccgcg
tgggcgatgaccattcacaaaagccaaggttcggaatttacgcgggtgttgctggtcttg
ccggagatggatgatttgcccttgttagggcgcgaattgctgtataccgcagtgactcgt
gccaagcaggggattcatattctggcgagtcgggcgacgttggggcgggcattacggcag
gtaacgccgcccgcgtcacagttacaagcgcggctaggggcttatatttttactggaaga
ggagatgttacatga
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