Thiothrix winogradskyi: L2Y54_15485
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Entry
L2Y54_15485 CDS
T08347
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
twn
Thiothrix winogradskyi
Pathway
twn00860
Porphyrin metabolism
twn01100
Metabolic pathways
twn01110
Biosynthesis of secondary metabolites
twn01120
Microbial metabolism in diverse environments
twn01240
Biosynthesis of cofactors
Module
twn_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
twn_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
twn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
L2Y54_15485 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
twn04147
]
L2Y54_15485 (hemB)
Enzymes [BR:
twn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
L2Y54_15485 (hemB)
Exosome [BR:
twn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
L2Y54_15485 (hemB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
UJS23336
UniProt:
A0ABY3SXY1
LinkDB
All DBs
Position
complement(3106486..3107490)
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AA seq
334 aa
AA seq
DB search
MAIYPGMYPYTRMRRMRRDDFSRRLMRENVLTANDLIWPVFVMEGENQREAIASMPGVER
ISIDLLVKEAEAAFKLGIPAMAIFPVTPQSAKTDKAEEAWNPDGLAQRAVRAIKAAVPEL
GVITDVALDPFTSHGQDGLMDENGYILNDETVAALTKQALSHAEAGADVVAPSDMMDGRI
GEIRDVLEQHGHLNTRILAYSAKYASSFYGPFRDAVGSAANLKGGNKYSYQMDPANSDEA
LWEVALDLQEGADMVMIKPGMPYLDIVRRIKEEFKAPTYVYQVSGEYAMFKAAGMNGWIN
EKACVMEALLGMKRAGADGILTYYAKQVAEWLRE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggctatttaccccggaatgtacccttacacccgtatgcgcaggatgcgccgtgatgat
ttttcccgccgtttaatgcgcgaaaatgtgctgactgccaatgatttgatttggccggtg
tttgtgatggagggcgagaatcagcgcgaagccattgcctccatgcccggtgtggagcgg
attagcattgacctgttggtgaaagaagcggaagccgcgtttaagctgggaattccggca
atggcgattttccctgtgactccgcaatcggcgaaaaccgataaggcggaagaggcgtgg
aatcccgacggtttggcgcaacgcgccgtgcgggcgattaaagccgctgtgccagaattg
ggcgtgattaccgatgtggcgctcgacccgttcacctcgcacgggcaagacggtttgatg
gatgaaaacggctatatcctcaacgatgaaaccgtggcagcgttgaccaagcaggcgctt
tcccacgccgaagcgggcgcggatgtggttgcaccgtcggatatgatggatgggcgtatc
ggtgaaatccgtgacgtgttggaacagcatgggcatttaaacacacgcattctggcgtat
tccgcgaaatacgcctccagcttttatggtccgttccgtgatgcggttggttcggcagca
aatctgaagggtggcaataaatacagctatcagatggaccctgccaattccgacgaagcc
ttgtgggaagtcgcgctcgatctgcaagaaggcgcggatatggtgatgatcaagccggga
atgccctacctcgacatcgtgcgccgcatcaaagaagagttcaaagcgcccacctacgtc
taccaagtcagcggcgaatacgcgatgttcaaagcggcgggcatgaatggttggatcaac
gaaaaggcttgtgtgatggaagccttgctggggatgaagcgggcgggagcggatggtatt
ttgacgtattacgccaagcaagtcgccgagtggttgcgtgaataa
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