KEGG   Thiothrix winogradskyi: L2Y54_15830
Entry
L2Y54_15830       CDS       T08347                                 
Symbol
rep
Name
(GenBank) DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
twn  Thiothrix winogradskyi
Brite
KEGG Orthology (KO) [BR:twn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:twn03400]
    L2Y54_15830 (rep)
Enzymes [BR:twn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     L2Y54_15830 (rep)
DNA repair and recombination proteins [BR:twn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    L2Y54_15830 (rep)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 AAA_12 DEAD
Other DBs
NCBI-ProteinID: UJS23403
LinkDB
Position
3182080..3184077
AA seq 665 aa
MNGLNPQQQAAVTHLGSPLLVLAGAGSGKTRVITQKIAWMIRKGVHSADQIAAITFTNKA
AREMRERATQLLTKEEAKGLTVSTFHTLGLNIIKREAKRLGYKANFSILDAQDSEAILKE
LAHKEDVEEADNLRWIISRWKNDFISVEQAALLANTTDEKLAAILYEKYQRQIKAYNAVD
FDDLIVLPVQLFEQHPDALQHWQHKLRYLLVDEYQDTNACQYRLIRLLAGIRGALTAVGD
DDQSIYAWRGARPENIAQLQTDYPMLKVIKLEQNYRSTSRILQSANKLIGNNPHLFEKNL
WSTLGEGDPIRIMPARTPEHEAEKVIGEILKARFRDRADFKDFAILYRGNHQSRLFEKAL
RENNIPYKISGGTSFFSRAEVKDILGYLRLIANPDDDAAFLRIINTPKREIGTSTLEKLG
EYAHERHASLFTAAQELGFAQRISAKAQQRVETFGFWLHEMIRAAENADPTQIVKQVIND
TGYEDWLKNTCNTPKQAESRMKNVWEIVEWVRKLHDDGAGKETLSDIIAHMSLVDMLERN
SEEKEQDAVALMTLHAAKGLEFPNVFLVGVEEELLPHANSVDEQSIQEERRLAYVGITRA
QKNLTISYAKVRSRYGDASTVEPSRFLDELPPEHLEWEDKKVVSPEERQETARAYISNLQ
ALLGD
NT seq 1998 nt   +upstreamnt  +downstreamnt
atgaacggacttaacccccaacaacaagccgccgtcacccacctcggctctcccctcctc
gttctcgctggtgctggcagtggcaaaacccgcgtcatcacccaaaaaatcgcgtggatg
atccgcaaaggggtgcattctgccgatcaaatcgcggcgatcacgttcaccaataaagcc
gcccgtgaaatgcgcgaacgcgccacccaactcttgaccaaagaagaagccaaaggcttg
accgtttccaccttccacaccctaggcttaaacattatcaagcgtgaagccaaacgctta
ggctacaaagccaatttcagcattcttgatgcccaagacagcgaagccatcctcaaagaa
ctcgcccacaaagaagacgtggaagaagccgacaacctacgctggataatttcgcgctgg
aaaaatgacttcatctcggtcgaacaagccgccctgctggcaaataccaccgatgaaaaa
ctcgccgcgattttatatgaaaaataccaacgccaaatcaaagcctacaacgccgtcgat
ttcgacgacctcatcgtcttgccagtacaacttttcgagcaacaccccgatgccctgcaa
cactggcaacacaaattacgctacctgttggtcgacgaataccaagataccaacgcctgc
caataccgcctgattcgcctgttagcaggcattcgcggtgcactcacggcggttggagat
gacgaccaatccatctacgcttggcgcggcgcacgcccggaaaacattgctcaattgcaa
accgattacccaatgctcaaggtgatcaagctggaacaaaactaccgttccaccagccgc
attttgcaaagtgccaacaaactcatcggcaacaacccgcatttatttgaaaaaaatctg
tggagtaccctcggtgaaggcgacccaatccgtattatgcccgcccgcacccccgaacac
gaagccgaaaaagtcatcggtgaaatcctcaaagcccgttttcgtgaccgcgctgatttt
aaagattttgccattttgtaccgtggcaaccaccaaagccgtttatttgaaaaagctctg
cgcgagaacaatattccctacaaaatcagcggcggtacctcgtttttctcccgcgctgaa
gtcaaagacatcctcggctacctgcgcctcatcgccaaccccgacgacgatgccgctttc
ctgcgcattatcaacacccctaaacgcgaaattggcacctctacactggaaaaacttggc
gaatacgcgcacgaacgccacgccagcttgttcaccgccgctcaagaactcggctttgct
cagcgcatttccgccaaagcccaacaacgggtagaaaccttcggcttctggctgcacgaa
atgatccgtgccgctgaaaacgccgaccccacgcaaattgttaaacaagtcatcaacgac
actggctacgaagactggctcaaaaacacctgcaacacccccaaacaagccgaatcacgc
atgaaaaatgtctgggaaattgtcgaatgggtacgcaaacttcatgacgacggggcgggc
aaagaaacgctcagcgacatcattgcgcacatgagcttggtcgatatgctggaacgcaat
agtgaagaaaaagaacaagatgcggttgccttaatgaccttacacgctgccaaaggactg
gagtttcccaacgtgtttttggtcggcgtggaagaagaattactcccccacgccaacagc
gtcgacgaacaaagcatccaagaagaacgccgcctcgcctacgtgggcattacccgcgcc
cagaaaaacctcaccatcagctacgccaaagtacgctcacgctacggcgatgcctccacc
gttgaacccagccgcttcctcgatgaacttccccccgaacatctcgaatgggaagacaaa
aaagtcgtgtcgccggaagaacgccaggaaacagcgcgggcgtatatttctaacttacag
gcattattaggggattaa

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