Thiothrix winogradskyi: L2Y54_20975
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Entry
L2Y54_20975 CDS
T08347
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
twn
Thiothrix winogradskyi
Pathway
twn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
twn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L2Y54_20975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
twn02022
]
L2Y54_20975
02035 Bacterial motility proteins [BR:
twn02035
]
L2Y54_20975
Two-component system [BR:
twn02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
L2Y54_20975
Bacterial motility proteins [BR:
twn02035
]
Pilus system
Twitching motility proteins
L2Y54_20975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_23
VpsR
Mg_chelatase
AAA_16
HTH_28
AAA
AAA_19
HTH_50
AAA_22
FleQ
Motif
Other DBs
NCBI-ProteinID:
UJS24375
LinkDB
All DBs
Position
4245333..4246766
Genome browser
AA seq
477 aa
AA seq
DB search
MTEQTVLIIDDEPDIRELLEITLLRMGLDTITAGDVESALSQIEKYRPHLCLTDMKLPDG
SGIDIVRYLQKNHPHIPVAVITAFGSMDTAVEALKAGAYDFVSKPVDLPKLRELIQTALK
LSAGKGKQPAQTDDDSDTHSNSILGNSPAMQQLKATIHKLARSQAPVYIHGESGSGKELV
AHQIHQQGSRVKAPFVPVNCGAIPENLMESEFFGHKKGSFTGAMADKQGLFQAAHKGTLF
LDEVADLPLTMQVKLLRAIQEGAVKPVGGLEEIPVDVRILSATHKSLEHEVAAGHFRQDL
YYRLNVIKLKVPPLRERQEDILLLADFFLQKIAERWQMPPIRLSPAARQELGAYGFPGNV
RELENVLERASTLCDNNTIQPDDLQLPVAVVTPHPNPAPSRFGGVPLSGEGLEEKKVMKG
EADMLPAWNPVDEEAERDLILRALEQTRWNRTKAAEVLGMSFRQLRYRIQKYGLDEG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaaaccgtactcatcattgatgatgaacctgacattcgtgaactgttggaa
atcaccctgttacgcatggggctggataccatcaccgctggcgacgtggagagcgctctc
agccagatcgaaaaataccgcccgcacctgtgcctgaccgatatgaaactacccgacggt
agcggcatcgacattgtgcgttacctgcaaaaaaatcacccgcacattcctgtcgcggtg
attacggcgtttggcagcatggatacagcagtggaagcgctcaaagcgggtgcttacgat
ttcgtgtccaaacccgtggatttgccaaaactgcgcgagttgattcaaaccgccctgaag
ctttccgctggtaaaggcaaacagcccgcgcaaacggatgatgatagcgacacccacagc
aacagtattttgggcaattccccggcgatgcagcaactcaaagccaccatccacaaactg
gcacgtagccaagcgccggtttacatccacggtgaatcgggcagcggtaaggaattggtg
gcgcaccagattcaccagcaaggttcgcgggtcaaagcgccgtttgtgccggtcaactgc
ggggcgattcctgaaaatctgatggaaagcgaattctttgggcacaaaaaaggcagcttt
accggcgcaatggcggataagcaggggctgtttcaagcggcgcacaaaggcacgttgttt
ttggatgaggtggctgatttgccgttgactatgcaggtcaaattgttgcgggcgattcag
gaaggcgcggttaaacccgtgggaggcttggaagaaatcccggtggatgtgcggattctg
agcgcgacccacaagagtttagaacacgaggtcgcggcggggcatttccggcaagatttg
tattaccgtttgaatgtgatcaagttgaaagtgccaccgctgcgcgaacggcaggaggat
attttgctgttggcggactttttcttgcagaaaattgccgagcgttggcagatgccaccg
attcggttgtcgcctgcggcgcggcaagagttgggggcgtatgggtttccggggaatgtg
cgcgagctggaaaacgtgctggagcgggcgagtacgttgtgtgataacaatacgattcag
ccggatgatttgcagttgccggtggcagttgttacccctcaccccaaccccgcacccagc
cgctttggcggcgtccctctaagtggcgaggggcttgaagagaagaaggtgatgaaggga
gaagcggacatgttaccagcatggaatcccgtggatgaggaggcggaacgtgatttgatt
ttgcgggcgttggaacagacgcgctggaatcggacgaaggcagcagaagtattggggatg
tcgttccggcagttgcgttaccggattcagaagtatgggttggatgagggttaa
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integrated database retrieval system
