Tropheryma whipplei TW08/27: TW090
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Entry
TW090 CDS
T00117
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tws
Tropheryma whipplei TW08/27
Pathway
tws03420
Nucleotide excision repair
tws03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TW090
03430 Mismatch repair
TW090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tws03400
]
TW090
Enzymes [BR:
tws01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TW090
DNA repair and recombination proteins [BR:
tws03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TW090
MMR (mismatch excision repair)
Other MMR factors
TW090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Mac
ACAS_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CAD66775
LinkDB
All DBs
Position
88815..91046
Genome browser
AA seq
743 aa
AA seq
DB search
MTIPADLLKGLNPQQVEGVCYRGPTLLISAGAGSGKTKVLTHRIAGFLATGEASCDQILA
ITFTNKAASEMRHRTGDLVGLSVRDMQISTFHSVCVRILRECVGHLGKAKNFTIYDAADQ
RAIIKQICQSTDTFGLTASMVASQIGLLKNQMHTPDTYSRCLASNSTNGNSVTSITLQRE
QFILHVFRRYQEILKEANAFDFDDLISETVFLLQKSPEISAMYRNRWKYLLVDEYQDTNH
AQYRLILELTKGDKSDMSLTAVGDSDQSIYAFRGADIANIVNFENDFPDCHTILLEQNYR
SCQNILLAANALISNNQNRKDKNLWSELGAGEKVVAYCASSAEEEGRFVADRVRHLVDQG
ESLSDIAVFYRSNTQSRAIEESLIRQSIPYRVVGGTKFYERAEIKDILAYLTVIVNPDDT
LALRRILNVPKRGVGTVSENRLVEFASARGITLMQALSRIDEINIQPSAKSALRDLFYLL
NRFAGSSMPANELLDDLLKATDLLSRFNNTDDPQNEARKINIGDFVDSVEDFAKENPGGT
LSDFMTNIALMTSYDQSDDAPGQITLMTLHMAKGLEFDFVFLTGLEEGILPHEMSLKEKN
GIEEERRLAYVGMTRAKKVLHLSFSSYRKRYTDGVRLPSRFWDEIPQHLLRWHSRFTHKR
FTGPLYGFTARPAGESRQSVHVLKDRYPRESFSISDSVKHSVFGVGTVVDVLGLGPKQII
VVEFADKRRSLLASIAPIVKCKQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgacaattccggccgatttactcaagggtttgaacccccagcaggtggagggtgtctgc
tatagggggccaacccttcttatttccgctggcgccggcagtggtaagactaaggtgctg
acccataggattgccggatttctggcaacaggtgaagcatcctgtgaccagatattggcg
attacattcacaaataaggctgcatctgaaatgcgccatcgcaccggggatcttgttgga
ttatccgtcagagatatgcagatatctaccttccattcagtctgtgtgagaattcttcgt
gaatgtgtcgggcatctaggcaaggcaaagaatttcacgatatatgatgctgcagaccag
cgtgcgattatcaaacaaatctgtcagtctacggatacttttggactaacggcaagcatg
gttgcctcgcaaataggtctgttgaaaaaccaaatgcataccccagacacctattcgcgc
tgtcttgcctcaaattccactaatggcaattcggtaacttcgattaccttacagagagaa
cagtttatcctgcacgtttttaggcgctaccaggagattctgaaagaggcaaatgccttt
gactttgatgatcttatttccgaaacagtttttttactccagaaatccccggagatttct
gcaatgtatagaaaccgctggaagtatcttttggtagacgaatatcaggatacaaaccat
gcccagtataggcttattcttgagctgacaaaaggtgataaaagcgacatgtctctgaca
gctgtcggtgattcagatcagagtatatacgctttccggggtgctgatattgccaatata
gtgaatttcgaaaacgattttccggactgtcacacaatcttattggagcagaattaccgc
tcttgccagaatattcttttagctgccaatgcgcttatttcaaataatcagaatcgtaag
gataaaaacctgtggagcgaactaggtgccggtgagaaggttgttgcatactgtgcatct
tccgcagaagaagaggggcgttttgttgcagatagggtgcgccatctggtcgatcaaggt
gagagcttgtctgatatagcggttttttaccgatccaatactcagagcagagcaatagaa
gaatcactcatcaggcaatcaattccatacagagttgttggcgggacaaaattttatgaa
cgcgctgaaataaaagatattctggcgtatctgacagtaattgtcaatccagacgatacg
ctggctctcaggcgtattctaaatgttccaaagcgtggtgtcggaacggtatcagagaat
aggcttgttgaatttgccagtgctagaggcataacacttatgcaggcactttctcgcatt
gatgaaattaacattcagccatctgccaaatcagctcttcgggatctcttttacttatta
aatcgctttgccggatctagtatgccggccaatgaactgctcgacgacctgctaaaagct
acagaccttctaagtcgattcaacaacactgatgatcctcaaaatgaggctagaaagatc
aatattggggactttgtagattcggttgaggatttcgcaaaagaaaaccccggaggcact
ctatctgactttatgacaaatattgcacttatgacatcctacgatcagtctgatgacgca
ccgggccagattaccctcatgaccttacatatggcaaagggtcttgaatttgattttgtg
tttctaactggtctggaagagggtatccttcctcacgaaatgtctcttaaagagaagaat
ggcatagaagaagagcgtagacttgcctatgttggtatgacgcgcgcaaaaaaagttctt
cacctttcttttagtagctaccgaaaacgatacacagatggggtgcgcttgccgagtcgt
ttttgggatgaaattcctcagcatctcctgcggtggcacagtcggtttacacacaagaga
tttaccggtcccctgtacgggtttacagcgcgtcccgcaggggagtcacggcaatcagtg
catgttttgaaagaccgatacccccgtgagagtttttctatttcggatagtgtaaagcat
tccgtttttggtgttggaacggtggttgatgttcttggtttgggcccaaaacagataatt
gttgttgaatttgctgataaacgccgcagtttgctcgcgagtattgcacccattgtaaaa
tgcaaacaatag
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