Tropheryma whipplei TW08/27: TW128
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Entry
TW128 CDS
T00117
Symbol
hup
Name
(GenBank) DNA-binding protein HU-alpha
KO
K03530
DNA-binding protein HU-beta
Organism
tws
Tropheryma whipplei TW08/27
Brite
KEGG Orthology (KO) [BR:
tws00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tws03032
]
TW128 (hup)
03036 Chromosome and associated proteins [BR:
tws03036
]
TW128 (hup)
03400 DNA repair and recombination proteins [BR:
tws03400
]
TW128 (hup)
DNA replication proteins [BR:
tws03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TW128 (hup)
Chromosome and associated proteins [BR:
tws03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
TW128 (hup)
DNA repair and recombination proteins [BR:
tws03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
TW128 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
HU-HIG
LacI
Urease_beta
DUF2267
Motif
Other DBs
NCBI-ProteinID:
CAD66808
LinkDB
All DBs
Position
132298..132579
Genome browser
AA seq
93 aa
AA seq
DB search
MVSLNRTELVAKVAETSGVSRATVNSVIEETFAVFAETVRAGGKVTIPGWCSVTRSHRAA
RTGRNPQTGKTVEIPAGYSVRIAPGSKLKAAVK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
gtggtttctctgaatcgcactgaattggttgctaaggttgctgagacgtctggtgttagc
cgggctactgtgaactctgttattgaggagacctttgctgttttcgcggaaacggtacgt
gccggcggtaaggtgacgattcctggctggtgttctgttacacgctctcatagagctgcc
cgtactggtcgtaatccccaaaccggtaagaccgttgagattcctgccggttattctgtt
cgtatcgctcccggcagcaagttgaaagccgcagttaagtag
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