Tropheryma whipplei TW08/27: TW162
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Entry
TW162 CDS
T00117
Name
(GenBank) putative ABC transporter (ATP-binding and integral membrane)
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
tws
Tropheryma whipplei TW08/27
Pathway
tws02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tws00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TW162
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tws02000
]
TW162
Transporters [BR:
tws02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
TW162
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_22
AAA_29
AAA_16
RsgA_GTPase
MMR_HSR1
DUF87
AAA_33
DUF3987
nSTAND3
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
CAD66842
LinkDB
All DBs
Position
complement(197697..199415)
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AA seq
572 aa
AA seq
DB search
MLKDLLILAGKLRKCLGLFTLATLVLIIWNLAETGIAVVSLFISSAFFSDTQAELQGLFI
LLFSLVVVYPVFNLLDIWLAHDVANRILHILRVSTYSAINRIAPLGLQNKRTADIASAAL
SDTSELEWFYTQILPSAIFTIVNSIIFTTILTWLIGPIGLFMIIPMILTIIFPFVLVPIQ
RRQGVASRETLVDLRAAVLNAVQGQRELRSLGMVKKQHEVVIAATERVQKIKNAHNLRKA
LELAFSSLVTAAGSIILLIILTDRVLNGQLDGRILPVAILLAGLSVIPSYILADAMGRMG
DFGACAMRINKILKAKDPIPTEPRRGLEKHHNEDNTLVADDIGFSYDSQPVLSGVNLTVS
PSRSVAIVGHSGAGKSTLANLAMRFLDPDDGEMRFDGLNLHGYNPDVYRQRLSLVPQDCH
IFAGTIRQNLELAKDGVSDDAIWEALKLADIATLVESLGGLDAPVGDRGTTLSGGERQRI
GIARAFLRNPDMLILDEPLANIDPLLEANIAANVRRLRGGRTTIVIAHRLASIRIADHII
VLDNGGVVAQGTHKKLLNNMHYLELLGNQIQQ
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaagatctcttgatcctagctggcaagttacgcaaatgcctggggctatttacc
cttgcaacacttgtcctgattatatggaatctggctgagaccgggattgcggttgtgtcc
ttatttataagttcggcattcttttcagatactcaggctgaactacaagggcttttcatc
ttgttattctcactggttgtggtttatcccgtgtttaatctattggatatatggttggca
catgatgttgcgaacaggatcctgcatatccttcgagtcagcacatattcagctataaac
cgtattgctccattaggtttacaaaacaaacgaacggctgatattgcatcagctgcattg
agcgataccagtgagttggaatggttttacacacaaatacttccgtccgcaatatttacg
atagtgaactcgattatttttaccaccatattaacttggttaatcggtccaattgggcta
tttatgattatcccaatgatcctgacaattatatttccatttgtgctagtgcccatacag
agacgtcaaggtgttgcatcgcgggaaaccctagttgacctgcgcgcagcggttctgaat
gccgttcagggacaacgcgaattgcgatctctgggaatggtgaagaaacagcatgaagta
gttattgcagcaacagagcgggttcagaaaatcaagaatgcacataacctgcgaaaggct
ttagagcttgccttttcttcattagtcacagctgctgggtcaataatcctgctaataatc
ttgaccgacagggtgttaaatgggcaacttgatgggcggattctaccggttgcaatactt
ttagcggggctaagtgtaataccgagttatattcttgctgacgcaatgggaagaatggga
gactttggtgcatgtgcaatgcgaataaacaagatactgaaagctaaagatcccattcca
actgaacctaggcgcggcttagaaaagcatcataatgaggataataccctcgtggcggat
gatatagggttttcgtatgattctcaacctgtattatccggcgttaatttaacagtcagt
ccgtcaagatcggtcgccattgttgggcattccggcgcaggtaagagcacacttgccaat
ttggcaatgcgattccttgatcccgatgatggtgaaatgaggtttgatgggctaaattta
cacggctacaaccctgatgtttatcggcaacgcttgtctcttgtgccgcaagattgtcat
atctttgcggggacaatcagacaaaatctagaattggcaaaagatggggttagtgatgat
gcaatctgggaggcgctaaagctagctgatattgctacattggttgaatcacttggtggc
ctagatgcaccggttggtgaccgtggtacaaccctatcgggcggtgaacgtcagcgtatt
ggaattgccagggcatttctgcgtaatccagatatgctaatccttgatgagccgctggca
aatatagatccactgcttgaggcgaatatcgcagccaatgttcgcaggctccgcggaggg
cgaaccaccatagttatcgcacatcgcctggcatcaatccgcatagctgaccacataata
gtgctggacaatggcggggttgttgcgcagggcactcacaagaaattactgaacaacatg
cattatctggaattactcggaaaccaaatacagcagtaa
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