Tropheryma whipplei TW08/27: TW179
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Entry
TW179 CDS
T00117
Symbol
ung
Name
(GenBank) uracil DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tws
Tropheryma whipplei TW08/27
Pathway
tws03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TW179 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tws03400
]
TW179 (ung)
Enzymes [BR:
tws01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TW179 (ung)
DNA repair and recombination proteins [BR:
tws03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TW179 (ung)
Prokaryotic type
TW179 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAD66858
UniProt:
P67079
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All DBs
Position
221086..221778
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AA seq
230 aa
AA seq
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MGYLHVLAQRGVIHATWVSALEPVSSNLAAMGDCLRSLRSKGESFLPAPRNILRAFRYPF
DSVRVLIVGQDPYPTQGHPIGLSFAVDHKVRPLPGSLQNIYTEYRSDLNLDPPQHGDISL
WSERGVMLLNRTLTVRPGIPSSHRGLGWEEITQTAVRALAARDVPLIAILWGRHAQELKS
VLQSDRVAILESVHPSPMSATRGFFGSKPFSKANDLLRDLGSAPIDWRLT
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgggctatcttcatgttttggcgcaacgtggcgttattcatgcgacatgggtttctgct
ctggagccggtttcatccaatctcgccgcaatgggggattgcttgcggtcgcttcgctca
aagggtgagtcattcttaccggcaccgcgtaatattctcagggcttttcgctatccattc
gactctgtaagggttcttatagttggccaggatccgtatccaacccaagggcatccaatt
ggtcttagctttgctgtcgatcataaggtgcgtccgcttcccggcagtctgcaaaatata
tacactgagtatcgaagtgatttgaaccttgatccgccacagcacggtgatataagtctt
tggtcggaacgcggtgttatgctcttgaacaggactttaacggtccgcccgggcataccc
tcaagtcacagaggtcttggatgggaagagattacgcagactgccgttagagctcttgcg
gcccgcgatgttccgctgattgcgattttgtggggcaggcatgcacaggagcttaagtct
gttctacagagtgacagggttgccatactcgaatctgttcatccaagtcctatgtcggcc
acgaggggctttttcggatcaaagcctttcagtaaagcaaatgaccttttacgagacctt
ggttccgctccaattgattggcgtcttacctaa
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