Tropheryma whipplei TW08/27: TW303
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Entry
TW303 CDS
T00117
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
tws
Tropheryma whipplei TW08/27
Pathway
tws02024
Quorum sensing
tws03060
Protein export
tws03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tws00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
TW303 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
TW303 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TW303 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tws02044
]
TW303 (ffh)
Enzymes [BR:
tws01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
TW303 (ffh)
Secretion system [BR:
tws02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
TW303 (ffh)
Eukaryotic Sec-SRP protein
TW303 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
AAA_16
CbiA
AAA_33
AAA_24
Zeta_toxin
nSTAND3
SRPRB
AAA
DO-GTPase1
AAA_30
MobB
DEAD
APS_kinase
ADH_zinc_N
6PF2K
NACHT
AAA_18
ATP_bind_1
SMC_N
DNA_pol3_delta2
SLFN-g3_helicase
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
CAD66977
LinkDB
All DBs
Position
340094..341434
Genome browser
AA seq
446 aa
AA seq
DB search
MFETVSGRFLNALSTLRGRGSLVKRDIDVVLSEVYKTLLDSDVSFEIAQAFVHRVRGRSM
SQESLRAINPHKRVTQIVWEELVDLLGHQKTALKFSRTFPTIIMLVGLQGSGKTSFAGKL
AKWLMERGHTAALGACDLQRPAAASQLQAVAEQAGASVLIPKSGNVLDAVKTVVKTAREK
QFSVLIIDTAGRMNADSDMMDQLSEIDRLAKPHQTLLVVDSATGQEALNITRVFCQHLSV
TGVVMSKLDSDVKAGAALSVSSLRPIIFSCIGEGVDDLEQFNPDSVARRMLGMQGPLEEL
DDVLRLSDKTPDSHSPITLEDFLDSIQKIKNMRHKLLAFFPNSGDLESMLDSSETIRMQA
IVRSMTPQERAQPRMLNASRRLRIATGSGTTVNDINRLIQKFEHVLKVLSSGNSMKHMTF
MNGRFPSFGMRRNNSKTAKSKRRKHR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgagaccgtttctggccgttttttgaatgcgctttctacgctccgcggtaggggg
agtctggtcaaacgagatattgatgttgttctcagtgaggtttataaaactcttcttgac
tcagatgtgtcatttgaaattgcacaggcctttgtgcatagggtgcgtggcaggtcgatg
tcacaggagtctctgcgtgcaatcaatccgcacaaacgtgtcacccagattgtttgggag
gagcttgtagaccttttaggtcaccagaagactgccctaaaattctcccgcacattccct
accattatcatgctggttggccttcagggctctggcaaaacctcttttgccggaaagcta
gctaaatggcttatggagcgtgggcatacggctgcgcttggtgcatgcgacctgcaaagg
ccggcagctgccagtcaacttcaggcagttgcagagcaggccggtgccagcgtactaata
cccaagtcaggtaatgtcctagacgctgtaaaaactgtcgtcaagaccgcacgagaaaaa
caattcagtgttttgattattgacactgccggccgcatgaatgccgattcggacatgatg
gaccaactgagcgaaattgacaggcttgcaaagccacatcagactttgctggttgttgat
tctgcaacaggccaggaggctttaaatattacccgtgttttctgccagcacctcagtgta
acgggggttgttatgtcaaagcttgatagcgacgtaaaagcgggtgcagctctatcggtt
tcatcacttaggccgattattttttcctgcattggtgaaggggttgatgatcttgaacag
tttaatcctgacagtgtagcgcgtcgcatgctcggcatgcagggcccccttgaggagctc
gacgatgttctgaggctttctgacaaaaccccagactcacattcgcccattaccctagag
gattttttggactctatacaaaagataaaaaatatgagacacaagcttttggctttcttc
cccaactcaggcgatcttgaaagcatgctagatagcagtgaaactattcgtatgcaggca
attgtgaggtctatgactccgcaagaaagggcacagccgcgtatgctcaacgcgtcccgt
agattgagaattgccacagggtctggaacaacagtcaatgatataaatcggcttattcaa
aaatttgagcatgtattgaaggttttaagttccggcaatagcatgaaacacatgacattc
atgaatggccgttttccatcatttggcatgcggcgcaataacagcaaaactgcgaagtca
aaacggagaaagcatcgctag
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