Tropheryma whipplei TW08/27: TW477
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Entry
TW477 CDS
T00117
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
tws
Tropheryma whipplei TW08/27
Pathway
tws03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TW477 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tws03400
]
TW477 (uvrB)
DNA repair and recombination proteins [BR:
tws03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TW477 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TW477 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
NACHT
UB2H
DUF87
AAA_16
UvrD-helicase
AAA_5
AIG1
nSTAND3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CAD67144
UniProt:
Q83NI7
LinkDB
All DBs
Position
complement(513025..515058)
Genome browser
AA seq
677 aa
AA seq
DB search
MYKNLHPKYFRLAAEYDPSGDQPKAIGELSDRIESGETDIVLLGATGTGKSATIAWLIEK
LARPTLIIAHNKTLAAQLANEFRKFFPDNAVEYFVSYYDYYQPEAYVPKTDTFIEKDASV
NSEVERLRHRATTSLLTRRDVIVVATVSCIYGLGAPSEYLKAGFRLEVGQKISQRVLLER
FTQLQYNRNDVGFERGNFRVRGDTIEIIPVYEEYTVRIEMWGDEIERVLCLHPVTGNLLS
EQRGVLIFPASHYVTSSENLKRAIVDIRKELQQRLRYFKRNNSLLEAQRLETRTEYDIEL
MEQLGFCSGIENYSRHIDGRAPGEPPFCLLDYFDDDFLTVIDESHVTVPQIGSMHAGDFS
RKKALVENGFRLPSAIDNRPLCFDEFRQRVGQVIYLSATPGKYELSKSDGVVEQIIRPTG
LVDPKITVKPIKGQIDDLLEEIRKRKLLSERVLVTTLTKRMAEELTDFLSEAGVNVSYLH
SDIDTLHRVELLTSLRMGRIDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSTTSFIQ
TIGRAARHVSGEVHMYADNMTESMQKSIDETNRRRRIQQDYNRKMGVTPVPIKKTVSDIT
EVLSRPSRKIDCTILDSLPDPKIDGKQIKSHIKSLEAKMYMAAESLMFEEAAELRDEIQS
LKEKFLKPRGSGGKIRQ
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
gtgtataaaaacttacatccaaaatattttaggctcgctgccgaatatgatccatctggc
gatcaaccgaaggcgattggggagctgtcagacagaatagaatctggtgagactgacatt
gtgcttcttggagctacgggtacgggaaaatctgcaacaattgcgtggcttatagaaaaa
cttgcaagacctacgcttatcattgcccacaacaagactcttgcagcccagttggcaaat
gagtttcgtaagttttttcccgataatgcggttgaatactttgtgtcttattacgattac
taccagccagaggcatatgttcctaaaactgacacttttattgaaaaagatgcttctgtc
aattctgaggtagaaagattgcgacatagggcgacaacctctcttttgaccaggcgtgac
gttattgttgtcgccaccgtatcttgcatatatggtcttggtgcaccgtctgaatatcta
aaagcaggctttaggcttgaggttggtcaaaagatttcgcaacgagttcttttggaaaga
tttacacagcttcaatacaacaggaatgatgtcggatttgaaaggggcaattttcgggtt
cgtggcgacacgattgagataattccagtctacgaagaatatacagttcgcattgaaatg
tggggcgatgaaattgaaagggttctctgtttgcatccagttacgggaaatttactctcg
gaacagagaggtgttctaatatttccggcctcgcactatgttacaagttcagagaatcta
aaaagagcaattgtggatatacgaaaagaactgcagcagcgactccgatattttaagcga
aacaatagcttacttgaagcacagagacttgaaacgcgcacagaatacgatatagaactt
atggaacagttgggtttctgctcggggatagaaaattactcaagacatattgatggtaga
gcgcccggcgaaccgccattttgtctattagattattttgatgatgattttttaaccgtc
attgatgagtcccatgttactgttccgcagataggaagcatgcatgcgggtgacttttca
agaaaaaaggccctcgttgaaaatggatttcgcttacccagtgcaattgacaatcgtcct
ctatgttttgatgaatttcgtcagagagtggggcaggtgatatatctatcagccacacca
ggtaaatatgagctgagtaaatcagatggtgtggttgaacaaataattagaccaacagga
ctggttgatccaaagattacggtaaaaccaataaaaggtcagatagatgatcttttggaa
gaaattcgaaaacgtaaattgctctcagaaagagttcttgtaacaacacttactaagcgc
atggctgaagaattaacagattttctatctgaggctggtgtgaatgtcagttatttgcac
tcggatattgatacgctgcatcgcgtggagctcttgacgagtttacgcatggggagaatt
gatgttcttgttgggataaatttacttcgcgaaggtttggatttacccgaagtaagtctt
gttgcaattttagatgcggataaagaagggtttctgcgttcaacaacatcatttattcaa
acaatcggacgtgcagctcggcatgtgtcgggcgaagtgcatatgtacgctgataatatg
accgagtcaatgcagaaaagtattgatgaaacaaatcgacgcaggcgaatccagcaggat
tacaatcgcaagatgggcgtaacacctgttccgataaaaaaaacagtaagtgacataaca
gaggtattgtcaagaccttcgcgaaaaatagattgcacaattcttgacagcttgcctgat
ccaaagatagatggaaagcagataaagtctcatataaagagtcttgaggcaaaaatgtat
atggcagccgagagtttaatgttcgaagaagccgcagaattacgtgatgaaatacagtcc
ctcaaggagaagttcctaaaaccgcgaggcagtggcgggaaaattagacagtaa
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