Tropheryma whipplei TW08/27: TW604
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Entry
TW604 CDS
T00117
Symbol
pheT
Name
(GenBank) phenylalanyl-tRNA synthetase beta chain
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
tws
Tropheryma whipplei TW08/27
Pathway
tws00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tws00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TW604 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tws01007
]
TW604 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tws03016
]
TW604 (pheT)
Enzymes [BR:
tws01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
TW604 (pheT)
Amino acid related enzymes [BR:
tws01007
]
Aminoacyl-tRNA synthetase
Class II (U)
TW604 (pheT)
Transfer RNA biogenesis [BR:
tws03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
TW604 (pheT)
Prokaryotic type
TW604 (pheT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
CAD67269
UniProt:
Q83HH4
LinkDB
All DBs
Position
complement(684889..687774)
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AA seq
961 aa
AA seq
DB search
MAVLRVPVSWLLEYVHTQTGFVGETGIRSDTRRTHTDCPVAEDILESLLSVGFEGEILDR
PELSGPIVVGRVLDFTEEVHSNGKTIRWCKVRVCAPVQPNNTPLSKDCNPSTQTGNFSNA
DTNSALETRDIVCGASNFSKGDLVVVTLPGSNLPGGFHVTARKVYGHLSDGMIASEKELG
VGDNHDGILRLAEVFQGDELSKIREGDNALELLALTDSAVAVSITPDRGYAMSIRGIARE
YALANNIPFSDPLPDDVLPAGGLSIDLRCKPNAFFTLLIQEIENNQTPQWMVRRLQLAGI
RSVCPVVDITNYVMVETGQPLHAYDYDAIQGSLCVRTADKKETLDTIDGRRLELHTDDLV
VADANGALSLAGVIGGSRSRVTSDTKRILLEAGNFNPIDISLSSRRHKLYTEASARFARS
VDILIAQRALARAAELIRDLASGDITELGSAYINYTQQSPILLSTLDIERVVGCCFTREE
IMSSLRAIGCDVSCDSDHSTPDTQVMLVTPPSFRPDLVNVQDLAEEVIRVIGFNRIPSLR
LSVPHREQPVQSQQYKLENGKLENGYTLSPVTPPRTPPVTFEQRRLLGQSLAACGHVEVI
CYPFVNLAAAGICHIDVTHNPDSTHNPDSGSDPIIPTGVTRITEPGSSGVSGPDNVDVKE
KCSADTSVEHPTTRAISLHNPIDATEGYLRRSLIPGLLQCAHRNLSRGLCDLSIFEIGRV
FLGQLRTSNLIGCNSDSTCNACSRKNTIESMNEVYQPYTVSVLQTGSAIQKQPYTEGRKY
DLADVFDSARQIARGLGVDFHFVQDKHPAFHPGRCAKVICKHHHIGYTGQILPTLANKHN
LPDNVFACEINLDLVAQLGCSQEIVKTLPTSPAATQHLTLTLGNNIAAASVISVVKEGAG
ELLEDIRLIDEYKHEESDKKSLTFAMRFRDKEKTLTAQRVNLAKENAVRLASSKFGAIMR
R
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggcggtccttagggttcctgtatcttggctcttagaatacgttcatactcagactggc
tttgtcggtgagactggtatacgttctgatacgcgacgcactcacacggactgtccggta
gcggaagacattctagaatcacttttaagtgtcgggtttgaaggtgaaatacttgatcgg
cctgaactgtcaggacctatagttgttggtcgagtactcgacttcacagaggaggttcac
tcaaatggcaaaacaatacgatggtgcaaagttcgggtctgtgccccagtccagcctaat
aatacgcccctcagtaaagattgtaatccttcgacccaaacgggcaatttctccaatgca
gatacgaattctgcattagagacgcgggatatcgtctgtggtgcaagtaacttttctaaa
ggcgacttagttgttgtaaccctgccaggatctaatctccccggcggatttcacgttacc
gcacggaaagtctatggccatctttccgacgggatgatagcttcagaaaaggagcttggc
gtgggggacaatcatgacggaatactccggcttgccgaagtatttcagggagatgagctg
tcaaaaattcgtgagggtgataatgccctcgagttgctggccttgaccgattctgctgta
gcagtgagtattacccctgacaggggttacgccatgtcgatcaggggtatcgccagagag
tacgcccttgcaaataacataccctttagtgatcccttgccagatgatgttttgcccgcg
ggcggacttagtattgacctacggtgtaagccaaacgcatttttcactcttcttatacag
gagatagaaaataatcaaactccacaatggatggtccgccgattacaacttgccggcata
aggtcagtgtgccctgtcgttgatataacaaactacgtgatggttgagacaggtcagcct
ctgcatgcctacgattacgatgccatacagggctctctttgtgttcgcacagcagataaa
aaagaaacactggatactatcgatggaagacggttagaactacatacagatgatctggtt
gttgctgatgcaaatggagcgttatcgctcgccggggttattggaggcagtaggtctagg
gttactagtgacacaaagagaattctgcttgaagcaggtaacttcaaccctattgatatc
tctctatcatcccgacggcataagttatacactgaggcatcggctcgatttgcacgaagt
gttgatattctgattgctcagcgtgccttggctcgcgctgcagaacttatacgtgatttg
gccagcggggatatcacagagctaggtagtgcatacatcaattacacccaacaatcaccc
atacttttaagcacacttgatattgaacgtgtggtgggttgttgttttacacgggaggaa
attatgtcctcgttgcgcgcgattggctgtgatgtttcttgcgattctgaccactcaaca
cccgatacacaagttatgcttgtcacccccccaagttttaggcccgatctggttaatgtt
caagatttagcagaagaagttattcgcgtaattggctttaaccgcattccatcactgcgc
ttgtcagttccccatcgcgagcagccagttcaatctcaacaatacaagttagaaaacggc
aagttagaaaacggttatacactctcgccagtcaccccgcctaggaccccgccggtgact
ttcgagcaacgaaggctgcttgggcagtcactggctgcatgtgggcatgttgaggttata
tgttatccattcgtcaatttagctgctgcaggcatatgccatattgatgtcacacataac
ccggattccacacataacccggattcagggagtgacccaataatcccaactggcgtaacg
cgtatcacggaacctggttcaagcggtgtctctggcccggacaatgttgatgttaaagag
aagtgttcggctgacacttcagtagagcacccaaccacaagggcaatatcattacacaat
cctattgatgcaacagaagggtatctgaggcgcagtctcataccggggcttttgcagtgc
gctcacaggaatttatcacgcggattgtgtgaccttagtatttttgaaatcggtcgcgtt
tttcttgggcaactccgcacatcaaatttgataggctgcaattcggatagtacctgcaat
gcttgttcgcgtaaaaacaccatcgagtcaatgaatgaggtgtatcagccatatacagtc
tcggtcctacaaacaggttccgcaattcaaaagcagccttacacagaaggacgtaagtac
gatttggctgatgtgtttgattctgcccggcaaattgcccggggccttggggtagatttt
catttcgtacaggataaacaccccgcttttcatccagggcgttgcgctaaggttatctgt
aaacatcaccatataggttataccgggcaaatcctgccaactttggctaacaagcataat
cttcctgacaatgtgtttgcgtgtgaaataaatctggatcttgttgcgcagcttggatgc
tcgcaggaaattgtaaaaacccttcctacaagtcctgctgcaactcagcaccttactctg
acactcggcaataatatcgctgctgcaagtgttatatcagttgtcaaagaaggcgccggt
gaactcttggaagatataaggcttattgacgaatacaaacacgaagaatccgataaaaaa
tccctaacatttgcgatgcgctttagagataaggaaaagacgcttactgcacagcgagtt
aaccttgcaaaagagaatgccgttcgacttgcttcatctaagttcggcgcgattatgcgg
cgatag
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