Thiomicrorhabdus xiamenensis: HQN79_00105
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Entry
HQN79_00105 CDS
T07160
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
txa
Thiomicrorhabdus xiamenensis
Pathway
txa03030
DNA replication
txa03410
Base excision repair
txa03420
Nucleotide excision repair
txa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HQN79_00105 (polA)
03410 Base excision repair
HQN79_00105 (polA)
03420 Nucleotide excision repair
HQN79_00105 (polA)
03440 Homologous recombination
HQN79_00105 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
txa03032
]
HQN79_00105 (polA)
03400 DNA repair and recombination proteins [BR:
txa03400
]
HQN79_00105 (polA)
Enzymes [BR:
txa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HQN79_00105 (polA)
DNA replication proteins [BR:
txa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HQN79_00105 (polA)
DNA repair and recombination proteins [BR:
txa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HQN79_00105 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HQN79_00105 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_BrxR
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QKI88082
UniProt:
A0A7D4SYM0
LinkDB
All DBs
Position
20914..23724
Genome browser
AA seq
936 aa
AA seq
DB search
MTASNDFPVNPNSPFILVDGSSYLFRAFHAMPPLSNSKGQATGAIFGVINMLGKLLVQYQ
PEKMAVIFDAKGPTFRHEMYKEYKSHRPPMPDELRSQIEPIHEIVKALGLPLLVIDGVEA
DDVMGTLARQATEAKHDTLISTGDKDLAQLVNEHITLINTMNDTLMTPESVQEKFGVRAD
QIIDYLALVGDSADNIPGIPKCGPKTAVKWLNSFGNIDNLIANAPMISGKIGENLRNNLE
QLELSRQLTTIKLDCELPIGLADINRHAPDMDKLKELFAEYELRTWLGQVVKGEMPFTQN
NGAKAHSQTLQKKSAQPQTEQQPTTNSTVSAEPYQTVFSEEEFTQWLEWIQEADLFAIDT
ETTSLNQMRAEVVGICLAVQRKEKIHACYIPLAHDYKGAPEQISREKALNALKPILEDEK
IAKVGQNLKYDWHVLKNHSIEMRGMRFDTMLESYTLNSVATRHNMDDLALKYLSRRTIHF
EELAGKGKKQLTFNQIEIDKAAEYAAEDAEITLQLHQALWPQLQQEADLQKVFSEIEMPL
MPVLAKIEYNGVLVDTDMLAKQSQELSEKLDDLEQKAHLLAGEKFNLNSSKQLQTILFEN
QELPIIKKTPKGAPSTAEPVLVELAEQGHEMPNLILEYRSLAKLKSTYTDSLPKQINPDT
GRIHTSYQQAVASTGRLSSTEPNLQNIPVRSAEGRRIRQAFIARPGYKLMAADYSQIELR
IMAHLSGDQGLLDAFAHGKDIHRATAAEIFGVSLEEVTNEQRRSAKAVNFGLIYGMSAFG
LAKQLNVARNIAQDYINLYFARYPGVLHYMEKTKENAKQHGFVETLAGRRLYLPDINSRN
GQLRQYAERTAINAPMQGTAADIIKTAMIQIDQWLDSCDLDIQMIMQVHDELVFEVAEKD
LEKAQQQIISMMESAMTLEVPLVVEAGVGDNWDQAH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttccaatgatttcccggttaatccgaatagcccttttattttagtggatggt
tcttcgtacctttttcgtgctttccatgccatgccgcccctctccaattcgaaaggtcag
gcaaccggagctattttcggcgttatcaatatgctgggaaaacttctggtgcaataccag
ccggaaaaaatggccgtcattttcgatgccaaaggcccgaccttccgacatgagatgtac
aaagagtataaatcccatcgtccgccgatgccggacgaattgcgttctcagatcgagccg
attcacgaaatcgtcaaagcgctcggattacctctgctggtgatcgacggcgtcgaagcg
gatgacgttatggggactttggcgcgccaggcgaccgaagccaaacatgataccctgatc
tcgaccggagacaaagatctggcgcaactggtcaacgagcatatcacccttatcaacacc
atgaacgatacgcttatgacaccggaaagcgtacaggaaaaattcggcgtccgtgccgat
cagatcatcgattatctggctctggtcggcgacagtgccgacaatattccgggcattccg
aaatgcggtccgaaaaccgccgttaaatggctcaattccttcggcaatatcgataatctg
attgccaatgcgccaatgatttcaggaaagatcggcgaaaatctacgcaataacctcgaa
caactcgaactttcgcgacagttaaccaccattaaactcgattgcgaacttccgataggg
cttgcggatattaatcgccacgctccggatatggacaaactcaaagaactgtttgccgaa
tatgaacttcgcacctggctcggtcaggtcgttaaaggcgagatgccgtttactcagaat
aacggcgctaaagcgcatagccagactctacagaagaaatcggcgcagccacaaacagag
cagcaaccaacaacgaacagcacagtctcggcagagccctaccaaaccgtctttagcgaa
gaagaattcacgcaatggctagaatggattcaggaagccgatctgttcgccatcgatacc
gaaactacctctttgaatcagatgcgtgccgaagtcgtcggtatctgtctggcggttcaa
cgcaaagagaaaatccacgcctgttatatccctctggcacatgattacaaaggtgcccct
gagcaaattagtcgagaaaaagcattaaatgctttgaaacctattcttgaagacgagaaa
atcgctaaagttggtcaaaacttaaaatacgactggcatgttctgaaaaatcattctatt
gaaatgcgcggtatgcgtttcgataccatgcttgagtcctacaccttaaacagtgttgct
acccgtcacaatatggatgatctggcgcttaaatacctaagccgccgtacgatccatttt
gaagaactggccggtaaaggtaaaaaacagctcactttcaatcagatcgaaatcgataag
gctgcggaatacgccgccgaagatgccgaaatcacgctacaactgcatcaggctttatgg
ccgcaactgcagcaggaagcggacttgcagaaggttttcagcgaaattgaaatgccgcta
atgccagtattggccaagatcgaatataacggcgtactggtcgataccgatatgcttgcc
aaacagagccaggaattgtcggaaaaactcgatgaccttgaacagaaagcgcacctgctt
gccggcgagaaattcaatctgaattcctccaaacagctgcaaaccatcctgttcgaaaat
caggagttgccaattatcaaaaaaaccccgaaaggcgccccttctacagcggagccggta
ttggtcgaactggccgaacaggggcatgaaatgccgaatctgattttggaataccgcagt
ctggcaaaattgaaatcgacctataccgattctctgccgaaacagatcaacccggataca
ggacgaatccatacctcctatcagcaggcagtcgcctctaccggccgcctctcatccacc
gagccgaacttgcagaatattccggttcgcagtgccgaaggccgccgtatccgtcaagcc
tttatcgccagaccgggctacaagctaatggctgccgactactcgcagatcgaactgaga
attatggcccacctttccggtgaccaggggcttcttgatgcctttgcccacggcaaggac
attcaccgagcgactgcagcagaaattttcggcgtctcgcttgaagaagtgactaacgaa
cagcgccgcagcgctaaggctgtcaatttcggtctgatttacggcatgtcagcttttggt
cttgccaaacaactgaatgtcgcacgcaatatcgcccaagattacattaatctgtacttt
gcacgttatccgggcgtattgcattacatggaaaaaaccaaagaaaacgccaaacagcac
ggttttgtcgaaacactggccggacgccgtctgtatcttccggacatcaactcccgtaac
ggacagctacgccaatatgcggaacgtaccgccattaatgcaccgatgcagggaaccgcg
gcggatatcatcaaaaccgcgatgattcagatcgatcaatggttggatagctgcgatctg
gatattcagatgattatgcaggtgcacgatgaactggtattcgaagtcgccgaaaaagac
cttgaaaaagcgcaacagcagatcataagcatgatggaatcggctatgacgctggaagtt
cctctggtcgtcgaagccggggtcggcgataattgggatcaagcccattga
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