KEGG   Thiomicrorhabdus xiamenensis: HQN79_00105
Entry
HQN79_00105       CDS       T07160                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
txa  Thiomicrorhabdus xiamenensis
Pathway
txa03030  DNA replication
txa03410  Base excision repair
txa03420  Nucleotide excision repair
txa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:txa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HQN79_00105 (polA)
   03410 Base excision repair
    HQN79_00105 (polA)
   03420 Nucleotide excision repair
    HQN79_00105 (polA)
   03440 Homologous recombination
    HQN79_00105 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:txa03032]
    HQN79_00105 (polA)
   03400 DNA repair and recombination proteins [BR:txa03400]
    HQN79_00105 (polA)
Enzymes [BR:txa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HQN79_00105 (polA)
DNA replication proteins [BR:txa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     HQN79_00105 (polA)
DNA repair and recombination proteins [BR:txa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     HQN79_00105 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HQN79_00105 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 WHD_BrxR HHH_2
Other DBs
NCBI-ProteinID: QKI88082
UniProt: A0A7D4SYM0
LinkDB
Position
20914..23724
AA seq 936 aa
MTASNDFPVNPNSPFILVDGSSYLFRAFHAMPPLSNSKGQATGAIFGVINMLGKLLVQYQ
PEKMAVIFDAKGPTFRHEMYKEYKSHRPPMPDELRSQIEPIHEIVKALGLPLLVIDGVEA
DDVMGTLARQATEAKHDTLISTGDKDLAQLVNEHITLINTMNDTLMTPESVQEKFGVRAD
QIIDYLALVGDSADNIPGIPKCGPKTAVKWLNSFGNIDNLIANAPMISGKIGENLRNNLE
QLELSRQLTTIKLDCELPIGLADINRHAPDMDKLKELFAEYELRTWLGQVVKGEMPFTQN
NGAKAHSQTLQKKSAQPQTEQQPTTNSTVSAEPYQTVFSEEEFTQWLEWIQEADLFAIDT
ETTSLNQMRAEVVGICLAVQRKEKIHACYIPLAHDYKGAPEQISREKALNALKPILEDEK
IAKVGQNLKYDWHVLKNHSIEMRGMRFDTMLESYTLNSVATRHNMDDLALKYLSRRTIHF
EELAGKGKKQLTFNQIEIDKAAEYAAEDAEITLQLHQALWPQLQQEADLQKVFSEIEMPL
MPVLAKIEYNGVLVDTDMLAKQSQELSEKLDDLEQKAHLLAGEKFNLNSSKQLQTILFEN
QELPIIKKTPKGAPSTAEPVLVELAEQGHEMPNLILEYRSLAKLKSTYTDSLPKQINPDT
GRIHTSYQQAVASTGRLSSTEPNLQNIPVRSAEGRRIRQAFIARPGYKLMAADYSQIELR
IMAHLSGDQGLLDAFAHGKDIHRATAAEIFGVSLEEVTNEQRRSAKAVNFGLIYGMSAFG
LAKQLNVARNIAQDYINLYFARYPGVLHYMEKTKENAKQHGFVETLAGRRLYLPDINSRN
GQLRQYAERTAINAPMQGTAADIIKTAMIQIDQWLDSCDLDIQMIMQVHDELVFEVAEKD
LEKAQQQIISMMESAMTLEVPLVVEAGVGDNWDQAH
NT seq 2811 nt   +upstreamnt  +downstreamnt
atgactgcttccaatgatttcccggttaatccgaatagcccttttattttagtggatggt
tcttcgtacctttttcgtgctttccatgccatgccgcccctctccaattcgaaaggtcag
gcaaccggagctattttcggcgttatcaatatgctgggaaaacttctggtgcaataccag
ccggaaaaaatggccgtcattttcgatgccaaaggcccgaccttccgacatgagatgtac
aaagagtataaatcccatcgtccgccgatgccggacgaattgcgttctcagatcgagccg
attcacgaaatcgtcaaagcgctcggattacctctgctggtgatcgacggcgtcgaagcg
gatgacgttatggggactttggcgcgccaggcgaccgaagccaaacatgataccctgatc
tcgaccggagacaaagatctggcgcaactggtcaacgagcatatcacccttatcaacacc
atgaacgatacgcttatgacaccggaaagcgtacaggaaaaattcggcgtccgtgccgat
cagatcatcgattatctggctctggtcggcgacagtgccgacaatattccgggcattccg
aaatgcggtccgaaaaccgccgttaaatggctcaattccttcggcaatatcgataatctg
attgccaatgcgccaatgatttcaggaaagatcggcgaaaatctacgcaataacctcgaa
caactcgaactttcgcgacagttaaccaccattaaactcgattgcgaacttccgataggg
cttgcggatattaatcgccacgctccggatatggacaaactcaaagaactgtttgccgaa
tatgaacttcgcacctggctcggtcaggtcgttaaaggcgagatgccgtttactcagaat
aacggcgctaaagcgcatagccagactctacagaagaaatcggcgcagccacaaacagag
cagcaaccaacaacgaacagcacagtctcggcagagccctaccaaaccgtctttagcgaa
gaagaattcacgcaatggctagaatggattcaggaagccgatctgttcgccatcgatacc
gaaactacctctttgaatcagatgcgtgccgaagtcgtcggtatctgtctggcggttcaa
cgcaaagagaaaatccacgcctgttatatccctctggcacatgattacaaaggtgcccct
gagcaaattagtcgagaaaaagcattaaatgctttgaaacctattcttgaagacgagaaa
atcgctaaagttggtcaaaacttaaaatacgactggcatgttctgaaaaatcattctatt
gaaatgcgcggtatgcgtttcgataccatgcttgagtcctacaccttaaacagtgttgct
acccgtcacaatatggatgatctggcgcttaaatacctaagccgccgtacgatccatttt
gaagaactggccggtaaaggtaaaaaacagctcactttcaatcagatcgaaatcgataag
gctgcggaatacgccgccgaagatgccgaaatcacgctacaactgcatcaggctttatgg
ccgcaactgcagcaggaagcggacttgcagaaggttttcagcgaaattgaaatgccgcta
atgccagtattggccaagatcgaatataacggcgtactggtcgataccgatatgcttgcc
aaacagagccaggaattgtcggaaaaactcgatgaccttgaacagaaagcgcacctgctt
gccggcgagaaattcaatctgaattcctccaaacagctgcaaaccatcctgttcgaaaat
caggagttgccaattatcaaaaaaaccccgaaaggcgccccttctacagcggagccggta
ttggtcgaactggccgaacaggggcatgaaatgccgaatctgattttggaataccgcagt
ctggcaaaattgaaatcgacctataccgattctctgccgaaacagatcaacccggataca
ggacgaatccatacctcctatcagcaggcagtcgcctctaccggccgcctctcatccacc
gagccgaacttgcagaatattccggttcgcagtgccgaaggccgccgtatccgtcaagcc
tttatcgccagaccgggctacaagctaatggctgccgactactcgcagatcgaactgaga
attatggcccacctttccggtgaccaggggcttcttgatgcctttgcccacggcaaggac
attcaccgagcgactgcagcagaaattttcggcgtctcgcttgaagaagtgactaacgaa
cagcgccgcagcgctaaggctgtcaatttcggtctgatttacggcatgtcagcttttggt
cttgccaaacaactgaatgtcgcacgcaatatcgcccaagattacattaatctgtacttt
gcacgttatccgggcgtattgcattacatggaaaaaaccaaagaaaacgccaaacagcac
ggttttgtcgaaacactggccggacgccgtctgtatcttccggacatcaactcccgtaac
ggacagctacgccaatatgcggaacgtaccgccattaatgcaccgatgcagggaaccgcg
gcggatatcatcaaaaccgcgatgattcagatcgatcaatggttggatagctgcgatctg
gatattcagatgattatgcaggtgcacgatgaactggtattcgaagtcgccgaaaaagac
cttgaaaaagcgcaacagcagatcataagcatgatggaatcggctatgacgctggaagtt
cctctggtcgtcgaagccggggtcggcgataattgggatcaagcccattga

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