Thiomicrorhabdus xiamenensis: HQN79_00885
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Entry
HQN79_00885 CDS
T07160
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
txa
Thiomicrorhabdus xiamenensis
Pathway
txa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HQN79_00885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
txa03400
]
HQN79_00885
Enzymes [BR:
txa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HQN79_00885
DNA repair and recombination proteins [BR:
txa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HQN79_00885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_30
PIF1
nSTAND_NTPase5
Zn_ribbon_Top1
AAA_19
AAA_16
Zn_ribbon_LysW
zf-IS66
DUF2321
DZR
Motif
Other DBs
NCBI-ProteinID:
QKI88229
UniProt:
A0A7D4NJG9
LinkDB
All DBs
Position
195372..197666
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AA seq
764 aa
AA seq
DB search
MQSNTSGQDEADTSTNKAVLKVAVSGPFLTPLDYLDCDNLTETPEMWPRLIGRRVEIPFR
NRSLIAIVVAVAPADYALEKIKTILRWIDEEPILHPQDLTFLQWVSDYYHAPMGEVINTA
LPKRIRGGEEASIHGHDVWTITALGREQLQNLPAKAKAKRALAEQFLTCETPLNREICKA
QTASWRKFVNEWLDLGWVSQTSGPCWQEAVAVPGPQHALNSEQQSAVDQVVSHVRSGDGF
ASFLLQGITGSGKTEVYLAMVEHVLEMGRQVLILVPEIGLTPQMIQRFSAHLQRPIALMH
SAMNDTQRHCAWHSVRSGEVSVLMGTRSAVFAPFKDLGLCIIDEEHDTSYKQQDGVRYSA
RDILVRRAHQLQVPIVLGSATPSLESLFNVDQQRYRLLTLNRRAGTAKPPKIRLIDIRGE
KIQEGVGAKLKAAMQKHLQAGQQVLLFLNRRGFAPVLMCHECGWQAQCPSCDANMTLHQG
SYHQYLLCHHCGEQMNLPESCPQCGSEELHTVGQGTERLEETIVEWFPEKTVLRIDRDST
RLKGKMEELTQQAQKGEADILIGTQMLAKGHHFPKVTLVGLLDIDQGLFSCDYRATERMA
QLLLQVAGRAGRAEDEGEVLVQTHHPQHPLLLKLINEGYGAFAEAALAERKEAHLPPWRF
QCLVRCEAHNAQDALDFLNSLKAGLELQWQTLQQESADTVLELWGPVSAPMMRRQGRYRY
QLMLASDSRPKLHQLLTLMLPHIYQSPLARKVRWNLDIDPQDMY
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
ttgcagtcgaatacttcagggcaagatgaagccgatacttcgaccaataaggcggtcttg
aaagtcgctgtatcaggcccctttctaacaccgcttgactaccttgattgcgataattta
actgaaacacccgaaatgtggccgaggctaatcggccgacgggtagaaattccttttcgt
aaccgttcgctcattgccattgtggttgccgttgcgccggcggactatgcgctcgaaaaa
atcaaaaccattctccggtggatcgatgaggagccgattctgcatcctcaggatctgact
ttcctgcagtgggtcagcgactattatcatgcgcctatgggcgaagtgattaacactgcc
ctgccaaaacgtatccgtggcggtgaagaggcaagtattcatgggcacgatgtctggaca
attaccgcactcggtcgcgagcagctgcaaaatttacctgccaaagccaaggcaaaacgg
gctttggccgagcaatttctgacctgcgaaaccccgcttaaccgggaaatctgtaaagcg
caaaccgcgagttggcgaaagtttgttaacgaatggctcgatctcggctgggtaagtcag
actagcgggccctgctggcaagaagcggtggcagttcctggtccacagcatgcgctcaat
agcgaacagcagtcggcggtggatcaggtggtcagccatgttcgatccggagacggcttt
gccagcttcctgctccagggaattaccggcagcggcaaaaccgaagtttatctggcgatg
gttgagcatgtgctcgagatggggaggcaggtattgattctggttccggaaatcggtttg
acgccgcaaatgattcagcgtttttcggcccatcttcaacgcccgattgcattgatgcat
tcggcgatgaacgatactcaaagacattgcgcttggcattcggtgcgcagcggggaggtc
tccgttctgatgggaacccggtccgcggtgtttgccccctttaaggatctggggctctgt
attatcgacgaagaacacgacacttcctataagcagcaagatggcgtgcgctattcggca
cgggatattttggttcgccgagcccatcagctacaggtgccgattgtattaggttcagcg
acaccttcattggaaagcttgtttaatgttgatcagcaaagatatcgtttgttgaccctg
aaccgtcgagccggaacggccaagccgcctaagattcgcttgatcgatattcggggagag
aaaattcaggagggagtcggcgctaagctgaaagccgcgatgcagaaacatctgcaagcc
ggacaacaggtgctgctttttttgaatcgccgaggttttgctccggttctaatgtgccat
gaatgcggttggcaggcgcagtgtccgagttgcgatgccaatatgaccctgcatcaggga
agctaccatcaatacttgctctgccatcattgcggtgagcagatgaatcttcccgaatcc
tgtccgcagtgcggtagtgaagagttgcataccgtcggtcagggaaccgagcggctggaa
gagactattgtcgagtggtttcccgagaaaacagtattgcgaatcgatcgcgacagtacc
cgtttgaaaggaaagatggaggagttgacccagcaggcacaaaaaggcgaggcggatatt
ctgatcggaacccagatgctggcgaaaggccatcacttcccgaaagtgacgctagtcggt
cttttggatattgatcagggacttttcagctgcgattatcgggcaacagagcggatggcg
cagttgttgttgcaggtggccggtcgtgctgggcgggccgaagacgaaggtgaagtgttg
gtacagacgcaccatcctcagcatccgttgctgctcaaactgatcaatgaaggttacggg
gcttttgccgaagccgcgctagccgaacgtaaagaggcgcatcttccgccatggcgcttt
cagtgtctggttcgatgtgaggctcacaatgcgcaagatgcattggacttcctaaactcg
ctcaaggccggcctggagttgcagtggcagaccttgcaacaggagtcggctgatacggtg
ctcgaattatgggggccggtcagtgcgcctatgatgcgacgacagggaagatatcgttac
cagctcatgctggccagcgattcgcgaccgaaattacatcagctgttgactctgatgctg
ccgcatatttatcaaagccctctggcgcgtaaagtgcgctggaatttggatattgatcct
caggatatgtattga
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