Thiomicrorhabdus xiamenensis: HQN79_01190
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Entry
HQN79_01190 CDS
T07160
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
txa
Thiomicrorhabdus xiamenensis
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
txa03009
]
HQN79_01190 (dbpA)
Enzymes [BR:
txa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HQN79_01190 (dbpA)
Ribosome biogenesis [BR:
txa03009
]
Prokaryotic type
rRNA helicases
HQN79_01190 (dbpA)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QKI88286
UniProt:
A0A7D4T947
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All DBs
Position
complement(256884..258275)
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AA seq
463 aa
AA seq
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MTHSSDSFSELALRPELLGALQNLNFTAMTPIQAQSVPFILNGDDLIAQAKTGSGKTVAF
GLGLLQKLEPKWFSTQALVLCPTRELAEQVATEIRKLASQIENVKLLTLCGGTPFKPQAA
SLEYGAHIVVGTPGRVEDHVKRGTLFLDDLNVLVLDEADRMLEMGFEESLTTIIEQTPDE
RQSLLFSATFPDSIQQLAAHILQNPQHVKVESVHNDNAIRQHFYQVANEAERQKAVKLVL
LAHQTTSAVVFCNTKREVQDLTDDLKTQGFSAVALHGDLEQRERDQTLIQFANQSATVLV
ATDVAARGLDIDSVEVVINYHLAHDPEVHIHRIGRTGRAGKSGFACSLISDKQNYKVALL
EEALGFEIETEALPDDSVLMQRPIKAPMVTLQIDGGKKSKIRPGDILGALTGDGGIAGDQ
VGKIKVTAMRSYVAVSKNVSQQALNQLNHGKLKGRKTRARFLN
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
ttgacacattcttccgactctttttctgaacttgccctacgccctgaattgcttggcgca
ttgcaaaacctgaacttcaccgccatgacgccgattcaggcgcagagcgtgccgtttatt
ttgaatggcgacgacctgattgcgcaagccaaaaccggttcgggaaagaccgttgctttc
ggtttgggcttactgcaaaagctggaaccgaagtggttttcaacgcaggcgttggtatta
tgcccgacccgagaactggcggaacaggtggcgaccgaaatccgcaaactcgccagtcag
atcgaaaacgtcaaactgctgaccctgtgcggcggtacgccttttaaaccgcaagcggct
tcactggaatacggcgcgcatattgtggtcggcacaccgggacgtgtggaagatcacgta
aaacgcggtacgctgtttttggatgatctgaatgtactggtgctggacgaagccgaccgc
atgctggagatgggctttgaagagtcattgaccaccattatcgaacaaacgccggacgaa
cgccaaagtctgctcttcagcgcgacctttccggattcgattcaacaactcgccgcgcat
attctgcagaatccgcagcacgttaaagttgaatctgtacacaatgacaacgccattcgc
cagcacttttatcaggttgccaatgaggccgaacgtcaaaaagcggtcaaactggttttg
ctggcgcatcagaccacttctgcagtggtgttctgcaataccaaacgcgaagtgcaggat
ttgaccgacgaccttaagacgcaaggattcagcgccgtggcgctacatggcgatctggag
cagcgcgaacgcgaccagaccctgattcagtttgccaatcaaagtgcaaccgtactggtc
gccaccgatgtcgcagcgcgcggtctggatatcgattcggtcgaagtagtcatcaactat
catctggcgcacgatccggaagtgcatattcaccgtatcgggcgcaccggccgtgccggt
aaaagcggttttgcctgctcgctgatcagcgacaagcaaaattacaaagtggcactgctg
gaagaagccttagggtttgagattgaaaccgaagcgctccccgacgattccgtactgatg
caacgcccgatcaaagccccgatggtgaccctgcaaattgacggcggcaagaaaagtaaa
atccgcccgggcgatattttaggcgcgctgaccggagacggcggcattgccggagatcag
gtcggcaaaataaaagtcacagcgatgcgttcctatgttgcggtcagcaagaacgtcagt
cagcaagctctgaatcaactgaaccatggcaaactgaaaggacgtaaaacgcgcgcacgt
tttttgaattga
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