Thiomicrorhabdus xiamenensis: HQN79_01315
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Entry
HQN79_01315 CDS
T07160
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
txa
Thiomicrorhabdus xiamenensis
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
txa03009
]
HQN79_01315 (rsmB)
Enzymes [BR:
txa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
HQN79_01315 (rsmB)
Ribosome biogenesis [BR:
txa03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HQN79_01315 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltr_RsmF_N
Methyltransf_31
Methyltransf_25
FtsJ
YDR249C_C
Motif
Other DBs
NCBI-ProteinID:
QKI88311
UniProt:
A0A7D4NP93
LinkDB
All DBs
Position
complement(285713..287050)
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AA seq
445 aa
AA seq
DB search
MSQSNENSGSHTRFVALKMCLSVIEQGRSLSQVLPEGLAQFSDRRERAFVQNLVLGTLRW
QFRLMAIRSQLLKKKLKAKDEDVNQLILLGLFQILYTDTAKHAAVSETVNVTAKLKKPWA
KGLINGVLRNFMREQASICAEVDLKPAQKYAHPQWFFKALRKAYPDNWQQILEANNQIAP
LTLRNNRKFQNRDQLQQLLSDAGFATELHPDCEQGLILQQSTDITRLPTYDEGGFSVQDA
AAQQAAQLLQPKAGEHILDACAAPGGKTSHLLEYSDGDIDLFALEKEPERLDRLAENLYR
LDLQCDYTVGDAAEPETWWDGRPFDKILLDAPCSATGIIRRHPDIKWHRVPEDIEELVQI
QSRILDALWPTLKPGGRMLYATCSVLPQENSQQIQAFLERTTDAKLVPLAVEWGWHGSTT
GRQILPGNHGMDGFYYCLLEKAQSA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtcgaacgaaaacagcggcagccacacacgtttcgttgcgctgaagatgtgt
ctcagcgtaattgaacaggggcgctccctgagccaggtgcttcccgaagggctggcgcag
ttttccgaccgccgcgaacgcgcttttgtacagaatctggtgctgggcaccttgcgctgg
caattccgtttgatggcgatccgttcgcagcttcttaagaaaaaactcaaagccaaagac
gaagacgtcaaccagctgattcttctcggcctgtttcaaattctctacaccgataccgcg
aaacatgcagcggtatcggaaactgtcaatgttacggcaaaactcaagaaaccctgggca
aaaggcctgatcaacggcgttttgcgcaatttcatgcgcgaacaggcgtcgatctgcgcc
gaagttgatctcaagcctgcgcagaaatatgcccacccgcaatggttttttaaagcgcta
cgcaaagcttatccggacaactggcagcagatcctcgaagccaacaaccagattgcgcct
ctgacgctacgcaacaaccgtaaatttcaaaaccgtgaccagcttcagcaactgctttct
gacgctggttttgctacggaactgcaccccgattgtgaacaggggctgattctgcaacaa
agcaccgacattacccgtttgccgacctatgatgaaggcggattcagcgtacaggatgcg
gccgcccaacaggccgcgcaacttctccagccaaaggccggagagcatattctcgacgcc
tgtgccgccccgggcggtaaaaccagtcacctgctggaatacagcgacggcgatatcgac
cttttcgcactggaaaaagagcccgagcgtctggaccgcctggcggagaacctgtaccga
ctggatctgcagtgcgactacaccgtcggtgatgccgccgaacctgaaacctggtgggac
ggacgacccttcgacaagatcctgcttgatgccccttgttcggcaaccggcattatccgc
cgtcatccggacataaaatggcatcgcgtgccggaagatatcgaagaactggttcagatt
caaagccgtattctcgatgccctttggcccactttaaaaccgggcggccgcatgctttac
gcgacctgttcggttttaccgcaggaaaacagtcagcagatacaggcgtttctggagcgt
acgacggatgcaaaactcgttcctttagcagtagaatggggttggcacggcagtactacc
ggccgacagattctaccgggcaaccacggcatggacggtttttactactgcctgctggaa
aaggcccagagtgcttaa
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