Thiomicrorhabdus xiamenensis: HQN79_02200
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Entry
HQN79_02200 CDS
T07160
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
txa
Thiomicrorhabdus xiamenensis
Pathway
txa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HQN79_02200 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
txa03019
]
HQN79_02200 (groL)
03110 Chaperones and folding catalysts [BR:
txa03110
]
HQN79_02200 (groL)
03029 Mitochondrial biogenesis [BR:
txa03029
]
HQN79_02200 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
txa04147
]
HQN79_02200 (groL)
Enzymes [BR:
txa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HQN79_02200 (groL)
Messenger RNA biogenesis [BR:
txa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HQN79_02200 (groL)
Chaperones and folding catalysts [BR:
txa03110
]
Heat shock proteins
HSP60 / Chaperonin
HQN79_02200 (groL)
Mitochondrial biogenesis [BR:
txa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HQN79_02200 (groL)
Exosome [BR:
txa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HQN79_02200 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HQN79_02200 (groL)
Exosomal proteins of breast cancer cells
HQN79_02200 (groL)
Exosomal proteins of colorectal cancer cells
HQN79_02200 (groL)
Exosomal proteins of bladder cancer cells
HQN79_02200 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Lar_N
CbiA
Motif
Other DBs
NCBI-ProteinID:
QKI88469
UniProt:
A0A7D4NJN2
LinkDB
All DBs
Position
471237..472871
Genome browser
AA seq
544 aa
AA seq
DB search
MAKDVKFGLDAREKMVDGINILADAVKVTLGPKGRNVVLDKSFGAPTVTKDGVSVAREIE
LEDKFMNMGAQMVKQVSSQTNDVAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLNRGIH
KAVEAVVAEIKAMAKPCDTKASWAQVGTISANSDAKVGEMIAEAMERVSTEGVITVEEGS
SLEDELVVVEGMEFDRGYLSPYFTTNSDKMIAELEAPFILFYDKKISNIRDLMPTLEAVS
KASRPLLIIAEDVDGEALATLVINQMRGILKVAAVKAPGFGERRRAMLQDMAVLTGGTVI
SEEVGLSLESVTLDLLGETKSAVIGKDTTKLIDGAGSKDDIDSRVAQIKAQLESTTSEYD
KEKLQERLAKLSGGVAVLKLGAATEVEMKEKKDRVDDALHATRAAVQEGIVPGGGVALVR
ALSKVSVEGDNDDQNVGIQIAMRAMQEPMRQIAANCGLEGSVIVNKVMEGEGNFGFDASK
EEYVDMLEAGIIDPAKVTRSALQNAASVAGLVLTTGAAIADLPSKGGDDAAAAAGGMGGM
GGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagacgtcaaattcggtttagatgctcgcgaaaaaatggttgatgggatcaac
attcttgcggacgcagtaaaagtaacccttgggcctaaaggtcgtaacgttgtacttgat
aagtctttcggtgcgccgactgtaactaaagatggtgtttctgtggcacgtgaaattgaa
cttgaagataagttcatgaacatgggtgcgcaaatggtgaagcaagtttcttcacagacc
aacgatgttgccggtgacggtaccacaacggctacagttcttgcgcaagcgatcgttcgc
gaagggatgaagtcggttgcagcgggtatgaacccaatggatcttaaccgtggtattcac
aaagcggttgaagccgttgttgcggaaatcaaagcaatggctaagccttgtgataccaaa
gcttcttgggctcaggttggtactatctcagcaaactccgacgctaaagtcggtgaaatg
attgccgaagcgatggagcgtgtttctaccgaaggtgttatcaccgttgaagaaggttct
tctctggaagatgaactggtggttgtagaaggtatggaatttgaccgcggttacctgtct
ccttatttcacgactaactcagacaaaatgattgcagagttagaagcgccattcatcctg
ttctacgataagaaaatttctaacatccgtgatctaatgccgacgctggaagcggtttct
aaagcgagccgtccactgttgatcattgcggaagacgttgatggtgaagcgctagcgacg
ctagtaattaaccaaatgcgcggtattctgaaagttgcggctgttaaagcgcctggtttc
ggtgagcgtcgccgtgcaatgctgcaagatatggccgttctaaccggtggtacggttatt
tctgaagaagtcggtctaagcctggaatctgtaactctggaccttcttggtgaaactaag
tctgcagtcattggtaaagacaccactaaactgatcgatggtgctggttctaaagatgat
atcgacagccgtgttgcgcaaatcaaagctcagctggaaagtacgacttccgagtacgat
aaagagaagctgcaagagcgtctggcaaaactttccggcggtgttgcggttcttaaactt
ggtgcggctaccgaagttgagatgaaagagaagaaagaccgtgttgacgatgcgttgcat
gcgacgcgtgctgcggttcaggaaggtatcgttccaggtggtggtgttgctctggttcgt
gcgctttctaaagtgtctgttgaaggtgataacgacgatcaaaacgtcggtatccagatc
gctatgcgcgctatgcaggagccaatgcgtcagatcgcggcaaactgtggtcttgaaggt
tctgttatcgtaaacaaggtaatggaaggtgaaggtaacttcggtttcgatgcgtctaaa
gaagagtatgttgacatgcttgaagcgggtattatcgacccagctaaagtgacgcgttct
gcactgcaaaacgcagcatctgttgccggtttggttctgactacgggcgcggcgattgct
gacctgccttcaaaaggtggcgatgatgctgctgcagcggcaggcggaatgggaggaatg
ggcggcatgatgtaa
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