Thiomicrorhabdus xiamenensis: HQN79_02335
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Entry
HQN79_02335 CDS
T07160
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
txa
Thiomicrorhabdus xiamenensis
Pathway
txa00300
Lysine biosynthesis
txa00470
D-Amino acid metabolism
txa01100
Metabolic pathways
txa01110
Biosynthesis of secondary metabolites
txa01120
Microbial metabolism in diverse environments
txa01230
Biosynthesis of amino acids
Module
txa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HQN79_02335 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HQN79_02335 (lysA)
Enzymes [BR:
txa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HQN79_02335 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QKI88492
UniProt:
A0A7D4NQ38
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Position
complement(501667..502917)
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AA seq
416 aa
AA seq
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MTPFTYQNGTLFAENVSLAQLAENYGTPLYVYSRSELENRWKAFDQAFGKQPHLVCYAVK
TNSNIAVLNVLAKLGAGFDIVSQGELERVLRAGGDPKKVVFSGVAKQPAEIRRALEVGIR
CFNIESHAELDRIQQVAEEMDQVAAVSIRVNPDVDAKTHPYISTGLKDNKFGVDINTAPE
LYQQAANCSHVNPVGIDCHIGSQLTEITPFVDALERVLALKNTLQEQGIEIHHLDLGGGL
GITYTDETPPAISDYIGALLDKLNDPDMEVIIEPGRAIAGNAGVLLTQVEFLKPTEHKNF
AIIDAAMNDLIRPALYQSYQDIVAVTPREDGLQAQWDLVGPVCETGDFLGKDRSLNLQAG
DLLAVKSAGAYGFTMASNYNTRPRAAEIMVDGEQTHLIRRRETYDDLIGLETLIEE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgactccattcacctatcaaaacggcaccctgtttgccgagaacgtatccctggcgcaa
ctggccgaaaactacggaacaccgttgtatgtttattcccgtagcgaactggaaaaccgc
tggaaagctttcgatcaggccttcggcaaacagcctcaccttgtctgttatgcggtcaaa
accaattccaatattgctgttctgaatgttctggccaaactcggtgccggtttcgatatc
gtttcgcagggcgaactggaaagagtgctgcgtgccggcggcgatccgaaaaaagtggtc
ttttccggggttgccaagcagcctgcagaaattcgccgtgcgctggaagtgggcatccgc
tgcttcaatatcgaatcccatgccgaactggatcgtattcagcaggtcgccgaagagatg
gatcaggtcgcagccgtgtcgattcgcgtcaacccggatgtagatgccaaaacacaccct
tatatttccaccggtttgaaagacaacaaattcggcgttgatatcaacaccgccccggaa
ctctatcagcaggccgcgaactgcagccatgtcaatccggtcggaatcgactgccacatc
ggttctcagctgaccgagatcacgcctttcgtcgatgctttggaacgtgttttggcgctg
aaaaacaccttgcaagaacagggaatcgagatccaccacctggatctcggcggcggtctg
ggcatcacctataccgatgaaacccctccggccatcagcgactatatcggcgcgcttctg
gacaaactcaacgatccggatatggaagttattattgaaccaggccgagcgattgccgga
aacgccggcgttctgttgacgcaggtcgagttccttaaaccgaccgaacataaaaatttt
gccattatcgacgccgccatgaacgatttgattcgcccggctctgtaccagtcctatcag
gacatcgtcgccgttacaccgcgtgaagacggactgcaagcgcaatgggatctggtcgga
ccggtctgcgaaaccggcgacttccttggtaaagaccgctcgcttaacctgcaggcaggc
gacttgctggcggttaaatccgccggcgcttacggcttcaccatggcttccaactacaac
acccgtccgcgcgctgcggagatcatggttgacggcgagcagacacatctgatccgccgc
cgcgaaacttacgatgacctgatcggcctggaaacactgatcgaggaataa
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