KEGG   Thiomicrorhabdus xiamenensis: HQN79_03395
Entry
HQN79_03395       CDS       T07160                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
txa  Thiomicrorhabdus xiamenensis
Pathway
txa03030  DNA replication
txa03430  Mismatch repair
txa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:txa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HQN79_03395
   03430 Mismatch repair
    HQN79_03395
   03440 Homologous recombination
    HQN79_03395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:txa03032]
    HQN79_03395
   03400 DNA repair and recombination proteins [BR:txa03400]
    HQN79_03395
Enzymes [BR:txa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HQN79_03395
DNA replication proteins [BR:txa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HQN79_03395
DNA repair and recombination proteins [BR:txa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HQN79_03395
SSDB
Motif
Pfam: RNase_T WDR54
Other DBs
NCBI-ProteinID: QKI88680
UniProt: A0A7D4SHT3
LinkDB
Position
complement(736190..737071)
AA seq 293 aa
MSDNASLAQCAQLLNQSDDYQVLRKLKPTEQFNVPQQESYHRVCVIDTETTGLNTAECEI
IELGYQIIEFDSQGHFYRVLAAKNFLNEPEGEITPEVTKVTGLTMEDVAGHQIPWDQVAD
DIAQAQLCVAHNAAFDRPVLERYHDVFVDKIWGCSVVQIDWEALTDVGSRSQEFLCWKIG
QFFYGAHRALDDVQALSELLSQSVGEAKMPAFHYLLKKIRVAKSIIQATGAPFDIKDQLR
SRGYRWDASLRVWKKLIDDDQLETETVWLAENSTPNPTINKLKATDTFSIRAQ
NT seq 882 nt   +upstreamnt  +downstreamnt
atgagcgataacgcctcactcgcacaatgtgcccaactgttaaatcagtccgatgattat
caggttcttcgcaaactcaaaccaaccgaacaattcaatgttccgcaacaggaaagctat
catcgcgtctgcgtcattgacaccgaaaccaccggtctgaatacggccgagtgcgaaatc
attgaactcggctatcagattatcgagtttgacagtcagggacatttctaccgtgtgctg
gccgctaaaaacttccttaacgaaccggaaggcgaaatcaccccggaagtcaccaaggtc
accggcttgaccatggaagacgtcgccgggcatcagatcccttgggatcaggtcgccgac
gacatcgctcaggcacaactgtgcgtggcgcataatgccgctttcgaccgcccggtactg
gaacgctatcacgacgtttttgtcgacaaaatctggggctgttcagtggtacagattgac
tgggaagctctgaccgatgtcggctcgcgctcgcaggaatttctgtgctggaaaatcggc
cagttcttctacggcgcacaccgcgcgctggacgatgttcaggccctttcggaactgctt
tcacaatcggtcggcgaagcgaaaatgccggctttccactatctgctgaaaaaaatccgt
gtcgccaaatcgattattcaggcgaccggtgcgcctttcgatatcaaggatcagctgcgc
agtcgcggttaccgctgggatgcaagtttacgcgtgtggaaaaagctgattgacgatgac
cagctggaaaccgaaaccgtctggctggcggaaaactcgaccccgaacccgacgatcaac
aagctcaaagcgaccgataccttttcgattcgcgcgcaataa

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