Thiomicrorhabdus xiamenensis: HQN79_03395
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Entry
HQN79_03395 CDS
T07160
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
txa
Thiomicrorhabdus xiamenensis
Pathway
txa03030
DNA replication
txa03430
Mismatch repair
txa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HQN79_03395
03430 Mismatch repair
HQN79_03395
03440 Homologous recombination
HQN79_03395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
txa03032
]
HQN79_03395
03400 DNA repair and recombination proteins [BR:
txa03400
]
HQN79_03395
Enzymes [BR:
txa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HQN79_03395
DNA replication proteins [BR:
txa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HQN79_03395
DNA repair and recombination proteins [BR:
txa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HQN79_03395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
WDR54
Motif
Other DBs
NCBI-ProteinID:
QKI88680
UniProt:
A0A7D4SHT3
LinkDB
All DBs
Position
complement(736190..737071)
Genome browser
AA seq
293 aa
AA seq
DB search
MSDNASLAQCAQLLNQSDDYQVLRKLKPTEQFNVPQQESYHRVCVIDTETTGLNTAECEI
IELGYQIIEFDSQGHFYRVLAAKNFLNEPEGEITPEVTKVTGLTMEDVAGHQIPWDQVAD
DIAQAQLCVAHNAAFDRPVLERYHDVFVDKIWGCSVVQIDWEALTDVGSRSQEFLCWKIG
QFFYGAHRALDDVQALSELLSQSVGEAKMPAFHYLLKKIRVAKSIIQATGAPFDIKDQLR
SRGYRWDASLRVWKKLIDDDQLETETVWLAENSTPNPTINKLKATDTFSIRAQ
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataacgcctcactcgcacaatgtgcccaactgttaaatcagtccgatgattat
caggttcttcgcaaactcaaaccaaccgaacaattcaatgttccgcaacaggaaagctat
catcgcgtctgcgtcattgacaccgaaaccaccggtctgaatacggccgagtgcgaaatc
attgaactcggctatcagattatcgagtttgacagtcagggacatttctaccgtgtgctg
gccgctaaaaacttccttaacgaaccggaaggcgaaatcaccccggaagtcaccaaggtc
accggcttgaccatggaagacgtcgccgggcatcagatcccttgggatcaggtcgccgac
gacatcgctcaggcacaactgtgcgtggcgcataatgccgctttcgaccgcccggtactg
gaacgctatcacgacgtttttgtcgacaaaatctggggctgttcagtggtacagattgac
tgggaagctctgaccgatgtcggctcgcgctcgcaggaatttctgtgctggaaaatcggc
cagttcttctacggcgcacaccgcgcgctggacgatgttcaggccctttcggaactgctt
tcacaatcggtcggcgaagcgaaaatgccggctttccactatctgctgaaaaaaatccgt
gtcgccaaatcgattattcaggcgaccggtgcgcctttcgatatcaaggatcagctgcgc
agtcgcggttaccgctgggatgcaagtttacgcgtgtggaaaaagctgattgacgatgac
cagctggaaaccgaaaccgtctggctggcggaaaactcgaccccgaacccgacgatcaac
aagctcaaagcgaccgataccttttcgattcgcgcgcaataa
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