Thiomicrorhabdus xiamenensis: HQN79_03425
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Entry
HQN79_03425 CDS
T07160
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
txa
Thiomicrorhabdus xiamenensis
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
txa03400
]
HQN79_03425
Enzymes [BR:
txa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HQN79_03425
DNA repair and recombination proteins [BR:
txa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HQN79_03425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DEAD
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
QKI88685
UniProt:
A0A7D4T0A7
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All DBs
Position
744256..747789
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AA seq
1177 aa
AA seq
DB search
MSLDASVYPNPQQLFGLELDSQLADAQPRLQAIDPFHSFIVQAPAGSGKTSLLTQRYLGL
LSQVKAPEQIIAMTFTKKAAAEMRERIMKALVFGSRPLASDASLVDRNTWKLAQKALQRD
AEMDWQLLNNPNRLRIKTIDGFNSFLVGQMPLLSKMGAQLNLSDKPHQAYLEAVRQVLQE
ESLAPLVEQLLDLVNGRYSRAQNLLSDMLAKRDQWMDYLSYANSDARHALEQSLQEIVSS
ELRQHRKSLSKVNELLREVCDIADYAQHNDQPDLSRIAGAWPFAEEDTDSWRILASWVLT
KDGKKLRGRLTKNEGFPAGKGEAKERKDQMAQVLQGIADADDRQGTLVSALASLKDLPDP
RYSDDQWLKLQSLMQLLKVCAAYLKVVFQSRSEADFIEIAQAASQALGEKEEPTDLALQL
DYQIQHLLIDEFQDTSSKQFELVNKLVAGWQPDDARTLFIVGDPMQSIYRFREAEVANFL
KAWQGTFGPVTLQPLNLTVNFRSQKQVVEWVNHTFKQVLPKEDDMAKGAVKFSHALTPRE
DTEPAVFNHWEFHGDGDQSRRIVDFIVSRLNEQRQQERNHNEALYSRKIAVLGRSRSHLL
AIASELKKSAIPFRAVELETLQERQEVQDCLALSRALLHLGDRAAWIALLRSPLVGLNLY
DLHALIASKPYKTVAFCIEQALHGDGLIDLGALSFEGQQRIQKAWPVLQTAIAQLGIYPF
SKLLKECWLMLDGALSVESPVALQNVAAYFDVLGEFDHEALDLERLEELVETLFASADAS
EPSQQIELMTMHKSKGLEFDTVILPGLAKKARNDDPELVSWFQFMDSAGQEHLVLAPIDQ
KGQDKSYLSRLLNQFESQKQGFELGRLLYVACTRAKAQLHLFAELKIDEKTDEESYSAPK
GSMLEALWPALGRSVQEAIRVRLTQALPDSEETSEQEEAILVSRLPLNSAGLFDYLAHLP
EPTLPTSEAKEKTHKPVDKTPADENLEPDYWQGANLVSKASGNLVHNVLEQWARIGIETV
ADNFLQAQQAFYLRWLQQQGLNASQVDKAWDKVQRCLHNAYQNPQVRWALSRSQPQAMSE
YELQSINAQGEIELHIIDRTLVDQDGVRWIIDYKTSACDDCDQPQKRNAFIQQQSEYYRS
QLNRYAELFSAQESRPQKLVLYLAEIDAWVEVDQRTI
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagatgcctctgtttacccgaacccgcagcagctattcggcttggaactggac
agccagttggcggatgcgcagcctcgcttgcaggcgattgacccgtttcactcttttatt
gtgcaggctccggccggttcgggaaaaacctcgctgctgactcagcgctatctgggactc
ttgtcgcaggtcaaagcgccggaacagattatcgccatgacctttaccaaaaaggcagcg
gcggaaatgcgcgagcggattatgaaagcgctggttttcggttcccgtccgcttgcatcg
gatgcttctctggtggatcgcaatacctggaagctagcgcagaaagcgctgcagcgcgat
gccgaaatggattggcaattgctgaataacccgaatcgtctgcgcattaagaccattgac
ggttttaacagttttctggtcggacagatgccgctattgtcgaagatgggcgcgcaactg
aatctcagcgataaaccgcatcaggcctatctggaagcggtgcgccaggtgttgcaggaa
gagagtctagctcctctggtcgaacagctgctcgatctggttaacgggcgttattcccgt
gcgcagaatctgctcagcgatatgctcgccaagcgcgatcagtggatggactatctctcc
tatgccaattcggatgcgcgccacgctctggagcagtcactacaggagattgtttccagc
gaactgcgtcagcaccgcaaaagtttgagcaaggtgaatgagctgttaagagaagtctgc
gacattgccgactatgctcagcataacgatcagccggatctgtccagaatcgccggagcc
tggccgtttgccgaagaagataccgactcctggcggattctcgcttcctgggttttgacc
aaagacggcaagaaactgcgcggccgcctgaccaaaaacgaaggtttcccggccggaaag
ggcgaagccaaagagcgtaaggatcagatggcgcaggttctgcagggcattgccgatgct
gatgaccgtcagggcacgctggtatccgcactggcctccttaaaagatctgcccgacccg
cgctacagcgatgaccagtggttgaaactgcaaagcctgatgcagctgcttaaggtgtgc
gcggcctatcttaaggtggttttccagagtcgttccgaagcggactttatcgagatcgcg
caggcagcttcgcaggcactgggggaaaaagaagagccgaccgatctggcgctgcagctt
gattatcagattcagcatctgctgattgacgaatttcaggataccagttcgaagcagttt
gaactggttaataaactggttgccggctggcagccggacgatgcgcgcaccctgtttatc
gtcggtgatccgatgcagtcgatctaccgcttccgtgaagcggaggtcgccaacttcctc
aaggcgtggcaaggaactttcgggccggtaacgctgcaaccgttgaatctgacggttaac
ttccgttcgcagaagcaggtggtggagtgggttaaccatacctttaaacaggtgctgccg
aaagaggacgatatggccaagggggcggtcaagttcagccatgcactgaccccgcgcgag
gataccgagccagcggtctttaaccattgggaatttcacggcgacggtgatcaaagccgc
cgcattgtcgattttattgtgagccgtctgaacgaacagcgtcagcaggagcgcaatcac
aacgaagcgctctacagtcgcaaaattgccgtgctcgggcgttcgcgttcgcatctgctg
gccattgccagcgaactgaaaaagtcggcgatccctttccgggcagtggaactggaaacc
ttgcaggagcgtcaggaagtgcaggattgtctggcattaagccgggcactgctgcatctg
ggcgaccgtgccgcctggatcgcgctcttgcgctcgccgctggtcggtttgaacctgtat
gatctgcacgctctgattgcttccaagccttataagacggttgcgttctgtatcgaacag
gccctgcacggcgatggcctgattgatttgggcgcgttgagttttgaggggcagcagcgt
attcaaaaggcgtggccggtattgcagacagcgattgcccagctggggatttatccgttt
tcaaaactgctcaaagagtgctggctgatgctggatggcgctttgagtgtggaaagtccg
gtggcgttgcagaatgtcgccgcctattttgatgttctcggcgagtttgatcacgaagca
ctggatctggaacgtctcgaagagctggtggaaacgcttttcgccagcgccgatgcctcc
gagccgagtcagcagatagagttgatgaccatgcacaaatccaaggggttggagttcgat
accgtcattctgccggggctggcgaagaaggcgcgcaacgacgatccggaactggtgtcc
tggttccagtttatggattctgccgggcaggaacatctggtgctcgcgccgatcgaccag
aaaggacaggataaatcctatctgagtagactgttaaatcagttcgaatcacagaaacag
ggctttgagttggggcgcttgctgtatgtcgcttgtacgcgcgccaaggcgcagctgcat
ctgtttgcggagcttaaaattgatgaaaagaccgacgaagagagttacagtgcaccgaaa
ggctcgatgctcgaggcgctgtggccggctttgggccgatcggtacaggaggcgattcgc
gtacgtctgactcaggcgttgcccgacagtgaggaaaccagcgagcaagaggaagccatt
ctggtgtctcgtttgccgcttaatagcgctgggctgtttgattatttggctcatttgcct
gagccgactttaccaacttcggaagcgaaagagaaaacgcacaagccggtcgataagact
ccggcggatgagaatctggaaccggattactggcagggcgccaatctggtcagcaaggcg
tccgggaatctggttcacaacgttcttgaacagtgggcgcggatcggcatagaaacggtt
gccgataatttcctgcaggcccagcaggcgttttacctgcgctggctgcaacagcaggga
ttaaacgcttctcaggtggacaaggcgtgggataaggtgcaacgctgtctgcataacgct
tatcagaatccgcaggtgcgctgggcgctgtcgcgcagtcagccgcaggcgatgagcgag
tatgagttgcagtcgatcaatgcccagggcgaaattgagctgcatattatcgaccgtaca
ctggtcgatcaagacggtgtgcgctggattatcgattacaagaccagcgcctgcgatgat
tgtgatcagccgcagaaacgtaacgcctttattcagcagcagagcgaatactaccgttcg
cagctgaatcgttacgcagaacttttctcggctcaagaatccagaccgcaaaagcttgta
ctctatctggcagagatagatgcttgggtggaagtcgatcaacgaacgatttaa
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integrated database retrieval system
