Thiomicrorhabdus xiamenensis: HQN79_03950
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Entry
HQN79_03950 CDS
T07160
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
txa
Thiomicrorhabdus xiamenensis
Pathway
txa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HQN79_03950 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
txa03019
]
HQN79_03950 (orn)
03009 Ribosome biogenesis [BR:
txa03009
]
HQN79_03950 (orn)
Messenger RNA biogenesis [BR:
txa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HQN79_03950 (orn)
Ribosome biogenesis [BR:
txa03009
]
Eukaryotic type
Pre-60S particles
RNases
HQN79_03950 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QKI88779
UniProt:
A0A7D4SIK2
LinkDB
All DBs
Position
863514..864074
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AA seq
186 aa
AA seq
DB search
MKSDNNLIWIDLEMTGLDPKEHTIIEIATVVTDSQLNVLAEGPVIAIQTAQQELDKMDNW
CVTHHGNSGLTARVQASEIDLEQAEQQTIEFLSQYVPSGKSPMCGNSICQDRRFMVEHMP
KLEQFFHYRNLDVSTLKELARRWAPNVYSSHEKKGAHLALDDILESIDELKHYRRELFAE
NYRQND
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcagataacaacttaatttggattgatttggaaatgaccgggttggatccgaaa
gaacataccattattgagattgccacagtggtgaccgatagccagttaaatgtgcttgcc
gaagggccggtgatcgcgattcagaccgctcagcaagagctcgataaaatggataactgg
tgtgttacgcatcatggcaattccggattaacggcccgcgtgcaagcgagtgagatcgat
ctggagcaggccgaacagcagacgatcgaatttttaagccagtacgttccttccggtaaa
tcgccgatgtgcggtaattcgatctgtcaagatcgccgctttatggtggagcatatgcct
aaattggagcagttctttcattatcgtaacctcgatgtcagtacccttaaggagctggcg
cgccgctgggcgccaaatgtgtattcgtctcacgagaagaagggcgcgcatctggcattg
gacgatattctcgaatccattgatgagctaaagcattatcgtcgagagttatttgccgaa
aactatcgccagaacgactaa
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