Thiomicrorhabdus xiamenensis: HQN79_05705
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Entry
HQN79_05705 CDS
T07160
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
txa
Thiomicrorhabdus xiamenensis
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
txa03016
]
HQN79_05705 (truB)
Enzymes [BR:
txa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HQN79_05705 (truB)
Transfer RNA biogenesis [BR:
txa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HQN79_05705 (truB)
Prokaryotic type
HQN79_05705 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
FlgN
Motif
Other DBs
NCBI-ProteinID:
QKI89099
UniProt:
A0A7D4SIS4
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All DBs
Position
1240008..1240904
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AA seq
298 aa
AA seq
DB search
MAQYRNPPKQKVNGIVLLNKPAGVSSNGIMQQVRRIFNAEKAGHTGALDPFATGLLPVCL
GEATKVSGLLLDSNKRYTATLKLGEQSDTGDTEGEIIATAEVPELNEQKVDQVLQQFKGE
IEQIPPMYSALKHQGKPLYWYARQGIEIERPARKITVFDIQLKQLQERELVFDVLCSKGT
YVRTLGEDIAKALGTLGHLTALHRTQTGSLSGDDMLTLEEIEQQKEACLKPIDIALQHLP
AIHLNAEQSKHLLHGGMLRLPQPDSELVRFYNEQNVCIGVGEWHETKQLLKPKRLFNL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatatcgcaaccctccaaaacaaaaggtgaacggtatcgttcttcttaataag
ccggccggagtctcatccaacggcattatgcagcaggtcagacgtatttttaatgcggaa
aaggccggacataccggtgccttggacccattcgcaaccggtttgttgccggtctgtctc
ggagaggcaaccaaagtttccggactgcttctcgattccaataagcgctatacggcgacg
ttaaaactcggcgaacagagcgataccggtgacaccgaaggcgagatcatcgccaccgct
gaagttcctgaactgaatgagcaaaaggttgatcaggttttgcagcagtttaagggcgaa
atcgaacagatccctccgatgtattcggctctgaaacatcagggcaaaccgctgtactgg
tatgcacgtcagggcatcgaaatcgaaaggccggcgagaaaaatcaccgtctttgacatc
caactcaagcagttgcaagaacgggagttggtatttgatgttctttgctcaaagggaact
tatgtccgtaccctaggtgaagatattgccaaagcgttgggaacgctcggtcacttgacg
gcattgcaccgtacgcaaacaggcagtcttagtggtgatgacatgctaacgcttgaagaa
attgaacaacagaaagaagcgtgtctgaaaccgattgatattgcgctgcagcatctgccg
gcgattcatttaaatgcggaacagagcaagcatctgttgcatggcggtatgctgcgtctg
ccgcagccggacagtgaactggtgcgtttttataacgagcagaatgtctgtatcggcgtc
ggcgagtggcacgaaacaaaacaactcctcaaacccaagcgtttgtttaacctttaa
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