Thiomicrorhabdus xiamenensis: HQN79_05860
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Entry
HQN79_05860 CDS
T07160
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
txa
Thiomicrorhabdus xiamenensis
Pathway
txa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HQN79_05860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
txa02000
]
HQN79_05860
Transporters [BR:
txa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HQN79_05860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QKI90309
UniProt:
A0A7D4NLM2
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All DBs
Position
1278523..1280757
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AA seq
744 aa
AA seq
DB search
MDISDTGRSNTGVNVFGFILLFVLLSFVLNTSSVSADWNNPYPANSSNGKTLYSTFSSPP
KHLDPVISYNSNEWSFLSQIYEPPLQYHYFKRPYALQPLTLDNMPEIFYLAEDGNKLDQS
EQDNAVYTEYHFHLKQDIRFQPHPAFAKQGDQYRYHSLSEKDLLGIESINDFQYTASRNL
RAEDYVYAIKRMALRQNHSPILDTMKQYIIGLDAFSDQVTNDYQQLLQENGATVKNRYFD
LNAYSIDGVQVYSDFHFSIRIHGVYPQFLYWLTMNFFAPIPWEADKFYKQQLLVERNITL
DTSPVGTGPFYLAENNPNQIMRLKKNPNFHAEYFPQEGLPKDADPDLLNDAGKQLPLIDE
AVYTLEKESVPLWNKFLQGYYDASGVSSESFDQAVSVSGGGDMSLTPQMQQKGIQFINAI
QPTIFYFGFNMADPVVGGYSEKQQKLRQAISIAINYEEYISIFLNGRGIAAQGPIPPGIF
GFDQERFNPYVYEKKADRVQRKAIDTAKKILAEAGYPDGKQQDGTPLKLFYDTAATGPDS
QSQLNWYRKQFAKLGIELVIRATDYNRFQSKVRGAKVQLFSWGWNADYPDPENFLFLLYG
GNAAIHTNGAGINSANYDNPQFNQLFQQMKRLPNGEERLKIVQQMVEIARKDSPWVWGFH
PKALALYHSWLQNVWANPLANNTLKYRNLDVQQRSDKQLEWNKPVLWPIGLVMLLLVISV
YPLVRGYEKRQQAKINVSKKGVAR
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggatatttctgatacgggccgatccaatactggtgtcaatgtttttgggttcattcta
ctgtttgtgctgctgtcttttgtcctcaatacatcatctgtatcagccgattggaacaat
ccttatccggcaaacagcagtaacggaaaaaccctctacagtaccttcagctcaccacca
aaacatcttgacccggttatctcctataattcgaacgaatggtcgtttctctcgcaaatt
tacgaaccgccactgcaataccattatttcaaacgtccttatgctttacagcctttaacg
ctggataatatgccggagattttctatctggctgaagatgggaataaactggatcaaagt
gagcaggataatgcggtttataccgagtaccatttccatttaaaacaggatatccgtttt
caaccgcatcctgcatttgccaagcagggcgatcagtaccgttaccactcgctcagtgaa
aaggatcttctgggcatcgaatcgattaacgattttcaatataccgccagtagaaatctg
cgtgccgaggattatgtgtatgcgataaagcgcatggcgttaaggcagaaccattcgccg
attctcgatacgatgaaacagtatattatcggtttagatgcattttccgatcaggtaacc
aatgactatcagcaattgctgcaagaaaatggcgctacagtcaaaaaccgttattttgac
ctgaatgcttattcaatagatggcgttcaggtgtactccgattttcatttcagtatccgt
atccatggcgtttatccccagttcctgtactggctgacaatgaatttctttgctccgatt
ccctgggaggcagacaagttttataaacagcagctactggttgagcgcaatattacactg
gatacctctccggtcggaacgggtcctttctatctcgccgagaataatcctaatcagatc
atgaggttgaaaaaaaatcctaatttccatgccgaatattttccgcaagaaggcctgcca
aaagatgctgatcctgacttgttgaatgacgccggcaagcaactgccacttattgatgag
gcggtatatactctggaaaaggaaagtgtgcctttatggaataagtttttgcaggggtat
tacgatgccagcggtgtcagctcggagagttttgatcaagccgtcagcgtctccggcggc
ggagatatgtcgctgacaccgcaaatgcagcaaaaaggcattcagttcatcaatgcgatt
cagccgacgattttttatttcggtttcaatatggcagatcctgtggtcggcggttattcg
gaaaagcagcagaagctgcgtcaggcaatcagtattgcgatcaattatgaagagtatatt
tcgatctttctcaatggtcgcggtattgctgcacagggaccgattcctccaggcattttc
ggtttcgatcaagaacgctttaatccttatgtgtatgagaagaaagcggatcgagtccag
agaaaggcgatagacacggcgaaaaaaatattggctgaagcaggatatccggatggtaaa
cagcaagatggaacgccgttaaaacttttctatgataccgcagcgaccggcccagacagt
cagtctcagttgaattggtatcggaagcagtttgccaaacttggaattgaactggttata
cgtgcaacggactataaccgttttcaaagcaaggtacgcggtgccaaggttcagctattt
tcctggggctggaatgccgactatccggatccggaaaactttttgtttctgctctatgga
ggcaatgccgcgattcataccaacggtgccggaattaacagcgccaactacgacaacccg
caatttaatcagttattccagcagatgaagcgacttccgaatggtgaagaacgacttaag
attgtccagcaaatggttgaaattgcgagaaaagattccccttgggtttggggttttcac
ccgaaagccctggctttgtatcattcctggttgcagaatgtctgggccaatcctttggca
aacaatactttgaaatatcgtaatttggatgttcagcagcgaagcgataaacagctcgaa
tggaacaaacctgtcctctggccaattggtttggtgatgttgttgctggtgatttccgta
tatcccttagtccgaggctatgaaaaacgtcagcaggctaagatcaacgtgtcgaagaag
ggagttgcgcgctga
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