Thiomicrorhabdus xiamenensis: HQN79_05895
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Entry
HQN79_05895 CDS
T07160
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
txa
Thiomicrorhabdus xiamenensis
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
txa03032
]
HQN79_05895 (gyrA)
03400 DNA repair and recombination proteins [BR:
txa03400
]
HQN79_05895 (gyrA)
Enzymes [BR:
txa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HQN79_05895 (gyrA)
DNA replication proteins [BR:
txa03032
]
Prokaryotic type
DNA Topoisomerases
HQN79_05895 (gyrA)
DNA repair and recombination proteins [BR:
txa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HQN79_05895 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QKI89128
UniProt:
A0A7D4TFU9
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All DBs
Position
1287335..1289941
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AA seq
868 aa
AA seq
DB search
MAEFAREIIPIALEDEMEQSYLSYAMSVIVGRALPDVRDGLKPVHRRVLYAMNELKNDYN
KPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSPAAM
RYTEIRMAKIAHQLLADLEKETVNFSENYDGSESEPDVLPTRIPNLLVNGSSGIAVGMAT
NIPPHNLTETVSACLAYIDNPQIDISGLMEYLPGPDFPTHGIINGSAGIRQAYETGRGRV
QIRAKTAIETDKSGKSQIVVNEIPYQVNKAKLIERIAELVKEKKIEGITGLRDESDKDGM
RIVIELRRGEVPEIIINNLYKQTSMQTVFGVNMVALIDGQPKLLNLKQIIEAFVKHRREV
VTRRTIYELRKAREKAHILEGLAVALTNIDEMIELIKASPSPAVAKERMIDRDWPIGSVV
DLLERVEMADVRPEDLPEGFGAEGAIYKLSPVQAQAILEMRLHRLTGLEQDKILDEYREL
IAKIAEYLEILRNPDRLTEVVKEELVEVVENFGDGRRTEIDHSYQDLDAEDLIAEEDRIV
TISQDGYIKAQPLSDYRAQRRGGRGKSATAMKEEDQVGQLFVASTHDMLLCFSNRGKLYW
QKTWQLPLASRGSRGKPIVNVLPLEEGELITSVLPVDEFDDERVVFMATKNAVVKRVALK
DFSRPRANGIIALDLLDDDELVGTALTDGQQEIMLFSDIGKAIRFKEDDVRVMGRTARGV
RGMKLAEGHNIISMQVAKQDTLILTATENGFGKSTPVDDYSTINRGGQGVISIKTTERNG
IVVKAVAVTPEQEIVLITNKGTLVRTRVSEISIVGRNTQGVKLINVGAGEAVVDIAVVDV
EDDDELLDEENLDTAEVATESSEDKEQE
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatttgcacgagagattatcccaattgctctagaagatgaaatggagcagtcc
tatttaagttatgccatgagtgttattgtcgggcgtgcgcttcccgacgttcgagatggt
cttaagccggttcaccgtcgcgtactgtacgcgatgaacgaattgaagaacgattacaac
aaaccttacaaaaaatccgcacgtatcgtcggggatgtaatcggtaagtatcacccgcac
ggtgatacggctgtctacgatacgatcgttcgtatggctcagccgttctcattacgttat
atgctggtggacggacagggtaacttcgggtcggttgacggtgactctccagcagcgatg
cgttataccgagatccgtatggcgaagatcgctcaccagcttctggccgatcttgaaaag
gaaacggttaatttctcggaaaactatgacggttccgagagcgagccggatgttcttccg
acgcgaattccgaacctgctggttaacggttcctccgggatcgcggtcgggatggcgacc
aatattcctccacataacctgacggaaaccgtcagtgcctgtttggcctatatcgacaat
ccgcaaattgacatttctggtttgatggaatatctgcctgggccggatttcccaactcac
ggaattattaacggtagtgccggcattcgtcaggcgtatgaaaccggccgcggtcgtgtg
cagattcgtgcaaaaaccgccattgaaactgacaagagcggcaaatcgcaaattgtggtt
aacgaaattccttatcaggtcaacaaggcgaagctgatcgagcgaatcgccgagttggtt
aaagagaaaaaaatcgaaggaattaccggtctgcgtgatgagtcggataaagacggtatg
cgtatcgttatcgaactgcgtcgcggtgaggttccggaaattatcattaacaacctctat
aagcagacgtcgatgcagactgttttcggtgtcaatatggtcgccttgatcgacggccag
ccgaaactgttgaaccttaagcagattatcgaagcgtttgttaagcaccgccgcgaagtg
gttacccgtcgtacgatttacgaacttcgcaaagcgcgcgagaaagcacatattcttgaa
ggtttggcggttgcgctgaccaatatcgatgaaatgatcgaactgattaaggcttctcca
agcccggcggtggctaaagagcgcatgatcgaccgcgactggccgatcggttctgttgtc
gatcttttggaacgtgtcgaaatggcggatgtccgccctgaagacttgccggaaggattt
ggcgccgaaggtgctatctataaactttccccggttcaggctcaggcgattctggaaatg
cgtctgcaccgtctgaccggtctggaacaggataagattcttgacgaataccgagaattg
attgccaagattgctgaataccttgaaattctgcgtaacccggatcgtttgaccgaagtg
gtcaaagaggaattggtcgaagtcgtggaaaacttcggtgacggacgccgtaccgaaatt
gaccactcttatcaggatctggatgcagaagatctgattgcagaagaagatcgtatcgta
accatctctcaggacggttatattaaagcgcaaccactaagtgattaccgcgcgcaacgt
cgtggcggtcgcggtaaatccgcgacggcgatgaaggaagaagatcaagttgggcagctg
tttgtcgccagtacgcatgatatgctgctgtgtttctcaaaccgcggtaagctttactgg
cagaaaacctggcagttgccattagccagtcgcggcagtcgtggtaaaccgattgttaat
gtattgccactggaagaaggcgaactgattacttcggtattgccggtggatgagtttgat
gacgagcgcgttgtctttatggcaaccaaaaatgcggttgttaagcgtgttgctcttaaa
gacttctcgcgtccgcgtgccaacggaattattgctctagatcttctggatgacgatgaa
ctggtcggcacggctctgactgacggtcagcaggaaattatgctgttcagcgatatcggt
aaggcgatccgttttaaagaggatgatgttcgtgtaatggggcgtactgctcgcggtgtt
cgtggaatgaaacttgccgaaggacacaacattatcagtatgcaggtcgctaagcaggat
actctgattttgacagcaaccgagaacggcttcggtaaatccaccccggtggatgattac
tcgacaatcaaccgcggcggtcaaggagtgatttccatcaaaaccaccgagcgtaacggt
atagttgtcaaggcggttgcggttacaccggaacaggaaattgtgctgatcaccaacaaa
ggtactctggttcgtacccgcgtcagtgaaatctcgattgttggccgaaatacccagggc
gttaagctgattaacgtgggcgccggcgaggctgtagttgatatcgctgttgtcgatgtt
gaagacgacgatgagttgcttgatgaagaaaatctcgatacggcggaagtggcaaccgaa
agctcggaagataaagaacaggaatag
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