Thiomicrorhabdus xiamenensis: HQN79_06140
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Entry
HQN79_06140 CDS
T07160
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
txa
Thiomicrorhabdus xiamenensis
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
txa03009
]
HQN79_06140
Enzymes [BR:
txa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HQN79_06140
Ribosome biogenesis [BR:
txa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HQN79_06140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QKI89174
UniProt:
A0A7D4NLG4
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All DBs
Position
1337176..1338111
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AA seq
311 aa
AA seq
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MKQPNQPQTEKLQKILARAGFGSRRSVETLIEQGLVKVNNRVAKLGDRASQEDKIKVRDQ
LLKTSQLAPAATKVILYNKPEGLVCTRKDEKGRDTIFRHLPRLHQGRWISIGRLDLNTSG
LLILTNNGELANRLMHPSYQIEREYMVRVFGEVSEEIVKQLTKGVQLEDGPAKFDRVIAL
PSEEDSLNRWYRVIIKEGRNREVRRLWEAVGLQVNRLHRIRYGDFSLPRNLKKGKTEELT
WKQVNQLLRSVELAEEGRPDLRVNNRIDKAGLAKRDARKSERTMVGRYTGKGARKSNRMN
GGSGRAFKNGK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacccaatcagccacagacggaaaaactgcagaaaatacttgcacgcgccggt
tttggatcgcgacgttctgtcgagactctgatcgagcagggcctggtcaaggtcaacaac
cgtgtcgccaaactcggtgaccgagccagtcaggaagacaagatcaaggttcgtgatcaa
ctgctcaaaacgtctcaactcgccccagccgccactaaagtcattctgtataacaaaccg
gaaggactggtctgtactcgcaaggacgaaaaagggcgtgatacgattttccgtcacctg
ccgcgtttgcatcagggacgttggatcagtatcggccgtctggatcttaataccagcggt
ctgttgattctgaccaacaacggagaattggctaatcgtctgatgcacccgtcctaccag
atcgaacgcgagtatatggtccgtgttttcggcgaagtcagtgaagagatcgtcaagcag
ttaaccaaaggtgtacaacttgaagacggaccggcgaaattcgaccgcgtcatcgcttta
ccttccgaagaagactctttaaaccgttggtatcgtgtcatcattaaagaagggcgcaac
cgtgaagtccgtcgtctttgggaagcagtcggcttgcaggttaaccgactgcaccgaata
cgttacggcgatttctctttaccgcgaaatttgaaaaaaggcaaaactgaagagttgacc
tggaaacaggttaatcagctgctacgttccgttgagcttgctgaagaaggtcgtcctgat
ctgcgggtaaacaaccgcatcgataaagccggtttggccaaaagagatgccagaaaatcg
gagcgaaccatggttggccgctataccggtaaaggtgcgcgtaaatcaaatcgcatgaat
ggcggaagtggccgagcatttaaaaacggtaagtaa
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