Thiomicrorhabdus xiamenensis: HQN79_06220
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Entry
HQN79_06220 CDS
T07160
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
txa
Thiomicrorhabdus xiamenensis
Pathway
txa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HQN79_06220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
txa03400
]
HQN79_06220
Enzymes [BR:
txa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HQN79_06220
DNA repair and recombination proteins [BR:
txa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HQN79_06220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
DUF5710
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QKI89183
UniProt:
A0A7D4SSA7
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All DBs
Position
1352007..1353662
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AA seq
551 aa
AA seq
DB search
MIYLNVPFAQKDQAKSLGARWDPIARKWYIPEELQEQKSQFAQWLTNEMAYTEPTAKTQQ
PLHKQEPAQQNAFFEQAALSAHQHSVADHNTEVQKGQTLSQFLNRIQQVIWQNFAGGHWI
VAEVGSINERRGHQYLELNETDANGRSIANARAVIWKSQAAYLLQKFQQETQMQLCAGQK
LLMLCEVQFHSQYGLSLVIQEIDSSFSLGELEQKVRDIRQKLVSEGVYGNNKKLVLSNDF
FRIAVIAPPNAAGLGDFQADADKLSRFKLCHFDYFYSSFQGEQVEKEFARAFAEFTQRHQ
NESYDALVIIRGGGAKLDLHQLNEYSLAKQITEMPIPVLTGIGHERDNTILDEVAHSRFD
TPSKVIHYIWQQIQSQAMSAQQNWLRIQRVSQQEIIRLERQSEALWQQVKQQSQYKLNHW
KQVTLIPFTRIEQLAQNQISQEKQMLSWLIQQVKQNGEQQVERQKQRLFTLEKEINQQAY
SRIRSSKQQMQDWMAMILNAGPKVQIERGFAVISDQEGKTIVSKQQALKQDKLAIQFKDG
NITVSVDKNQN
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgatttatctaaatgttccttttgctcaaaaagatcaggcgaaaagtctgggcgcacgt
tgggatccaatcgccagaaaatggtatatccctgaagagttgcaggaacaaaaatcacaa
tttgctcaatggcttacaaatgagatggcttataccgagccaacagcaaaaactcaacaa
cctctgcacaagcaggagcccgcgcagcaaaacgctttttttgaacaggctgcgctgagt
gcacaccaacattccgtagcagatcacaacacggaagttcaaaaaggccagacactttct
caatttctgaatcgcattcaacaagtcatctggcagaacttcgccggcggccactggatt
gtagccgaagtaggcagcattaatgaacgcagagggcatcagtatctggaattgaacgaa
accgatgcaaacggacgttcaatcgccaatgccagagcggttatctggaaaagccaggcg
gcttatttgttgcaaaaatttcagcaggaaacgcaaatgcaactctgcgccgggcagaag
ctgttgatgctgtgcgaagtacagttccattcacaatatggcctgtcactggttattcag
gaaatcgacagtagcttcagtcttggagagctggaacagaaggtccgggacattcgccag
aaactggtttccgaaggggtctatggcaacaataagaaacttgtattaagcaacgacttc
ttccgcattgccgtcattgcgccgccaaatgctgccggtttaggcgatttccaagccgat
gcagataaactgagccggttcaaattatgccactttgactacttctacagcagctttcaa
ggtgaacaagttgagaaagaatttgcgcgggcttttgcagaatttacacaacggcatcaa
aatgaaagctacgatgccttggtgattattcgcggcggcggagcgaaactggatcttcat
caactcaatgaatacagtttagctaaacagatcaccgaaatgccaataccggttttgacc
ggaattggtcatgagcgcgataacacgattcttgatgaagttgcccacagccgttttgat
acgcccagcaaagtcattcattatatctggcagcagattcaatcccaggccatgagtgcc
cagcagaattggctacgtattcaaagggtgtcacagcaagaaatcattcgacttgagcgc
caaagtgaagccttatggcaacaggtcaagcagcaaagccaatataagctaaatcattgg
aaacaggttactttaataccgtttacccggattgagcaactggcacaaaatcaaatcagc
caagaaaaacaaatgcttagctggcttattcaacaggtaaaacagaacggtgaacaacag
gtcgaacgccagaaacagcgcctgttcacccttgaaaaagagataaatcaacaggcctat
agccgaatacgatccagcaagcaacagatgcaggattggatggcgatgatactgaatgcc
gggccaaaagtgcagattgaaagggggtttgccgtcatcagcgatcaggaaggcaaaact
atcgtgagtaagcagcaagcccttaagcaagacaaattagcgattcagtttaaggatggt
aatatcaccgttagcgttgataaaaaccagaattga
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