Thiomicrorhabdus xiamenensis: HQN79_07425
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Entry
HQN79_07425 CDS
T07160
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
txa
Thiomicrorhabdus xiamenensis
Pathway
txa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HQN79_07425 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
txa03400
]
HQN79_07425 (ruvB)
Enzymes [BR:
txa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HQN79_07425 (ruvB)
DNA repair and recombination proteins [BR:
txa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HQN79_07425 (ruvB)
RecFOR pathway proteins
HQN79_07425 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
Mg_chelatase
AAA_16
DUF815
AAA_22
Rad17
nSTAND3
RNA_helicase
TsaE
AAA_17
AAA_18
AAA_2
AAA_14
AAA_28
ABC_tran
AAA_24
TIP49
NB-ARC
Bac_DnaA
NPHP3_N
NTPase_1
IstB_IS21
AAA_19
AAA_33
Sigma54_activ_2
KAP_NTPase
AAA_13
Motif
Other DBs
NCBI-ProteinID:
QKI89404
UniProt:
A0A7D4SYW1
LinkDB
All DBs
Position
complement(1596597..1597610)
Genome browser
AA seq
337 aa
AA seq
DB search
MIETDRIVGAQETEDDIYNVPSVRPQQLFEYIGQGAVREQLSLSMQAAKMRAEPLDHVLL
YGPPGLGKTTLSNIIAQEMGVTLRQTSGPVIEKPGDLAAILTRLEPHDVLFVDEIHRLSP
VVEEVLYPAMEDFQIDIVIGEGPAAQSVKIDLPPFTLVGATTRAGLLTSPLRDRFGLVQR
LEFYSHDELCQIVTRSANILGLEAHLEGAMEVARRARGTPRIANRLLRRVRDYAQVRGDG
IITQEIANAALNLLEVDQLGLDKMDLRFLDALINKFDGGPVGIDSLSAAMGEERGTIEDV
IEPFLVQQGFVVRTSRGRLATNQAYQHLGVEKPQTNG
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaacggatcgtattgtcggtgcccaagagaccgaggacgacatttacaatgtg
ccgtctgttcgtccgcagcagcttttcgaatatatcggacagggcgcggttcgcgagcag
ttaagtctgtcgatgcaggcggctaaaatgcgtgcggaaccgctggatcatgttttgttg
tacggaccgccagggctggggaaaacgaccttgtcgaatattatcgctcaagagatgggc
gtaactttgcgtcaaacctccgggccggtgattgaaaagccgggtgatctggcggccatt
ctgacgcgtcttgaaccgcatgatgtactttttgttgatgagattcatagacttagcccg
gttgttgaagaagttctctatcctgcaatggaagattttcaaatcgatatcgttatcggc
gaagggccggccgcacagagtgtcaagatcgatttgccgccgtttactctggttggcgcg
accacgcgggcgggacttttgacgtcgccgttgcgcgatcgtttcggccttgtacagcgc
ctggagttttattcgcatgacgagttgtgtcagatcgtcacccgttcggcaaatatcctt
ggattggaagcgcatttggaaggggcgatggaagtcgccagacgcgctcgcggaacgccg
cgaatcgctaaccgacttctgcgtcgggtgcgtgattatgctcaggttcgcggggacggg
attattacccaggagatcgccaatgctgcgctaaacctgctggaagtcgatcaacttggt
ctggataagatggacctgcgctttctggacgcattgattaataaattcgatggtgggccg
gtcggtatcgacagtttgtcggcagcaatgggtgaagaaagaggtaccatcgaggatgtg
attgaaccgtttctcgttcagcaaggatttgtcgtacgcacatcgcgcggacgtctggca
accaatcaagcctatcagcatttgggtgttgaaaaaccgcaaacgaatgggtaa
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