Thiomicrorhabdus xiamenensis: HQN79_07520
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Entry
HQN79_07520 CDS
T07160
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
txa
Thiomicrorhabdus xiamenensis
Pathway
txa00260
Glycine, serine and threonine metabolism
txa00460
Cyanoamino acid metabolism
txa00630
Glyoxylate and dicarboxylate metabolism
txa00670
One carbon pool by folate
txa00680
Methane metabolism
txa01100
Metabolic pathways
txa01110
Biosynthesis of secondary metabolites
txa01120
Microbial metabolism in diverse environments
txa01200
Carbon metabolism
txa01230
Biosynthesis of amino acids
txa01240
Biosynthesis of cofactors
txa04981
Folate transport and metabolism
Module
txa_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HQN79_07520
09102 Energy metabolism
00680 Methane metabolism
HQN79_07520
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HQN79_07520
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HQN79_07520
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HQN79_07520
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HQN79_07520
Enzymes [BR:
txa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HQN79_07520
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
OKR_DC_1
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Phage_capsid
Motif
Other DBs
NCBI-ProteinID:
QKI89422
UniProt:
A0A7D4T0U6
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All DBs
Position
complement(1613799..1615070)
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AA seq
423 aa
AA seq
DB search
MFTKDMTIAGYDDLIADAIKNEENRQETHIELIASENYTSPRVMEAQGSYFTNKYAEGYP
GKRYYGGCEFADIVEQAAIDRAKELFGADYANVQPHSGSQANAAVYMALCEPGDTVLGMS
LAHGGHLTHGSHVSFSGKIYNAVQYGIDPVSGQIDYDEVQKLADEHKPKMIVAGFSAYSQ
VIDWSKFRAIADSVGAYLFVDMAHVAGLIAGGQYPNPVPFADVVTTTTHKTLRGPRGGLI
LCKSNPDLEKKLNSAIFPGGQGGPLVHVMAAKAVAFKECLEPSWKDYCVNVIKNAKAMAE
VFKARGCDVVSGGTENHLFLVSLIEKGLTGKLVDAALDAAHITINKNSVPNDPMSPFVTS
GIRVGTAAATTRGFDVEDCTNLATWMCDVIDACDQSSESWDESVVAEVREKVSALCAAKP
VYK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaaaagacatgacgattgctggatatgatgatctgattgccgatgcgattaaa
aatgaagagaatcgtcaagaaactcacattgagctgattgcgtctgagaactacaccagt
ccacgcgtaatggaagcgcaggggtcttacttcacgaataaatatgcggaaggttaccca
ggcaagcgttactacggcggttgtgagtttgctgatattgttgagcaggctgcgattgat
cgcgcgaaagagttgttcggcgcagattatgcgaacgttcagccgcactccggttctcag
gcaaatgcagcggtttacatggcattgtgcgagccgggcgataccgttctgggtatgagt
ctggcgcatggtgggcacctgacacacggttctcacgtaagcttctccggtaaaatctac
aatgcagtacagtacggtatcgatccggttagcggtcagatcgactatgacgaagttcag
aagttggctgacgagcacaagccgaaaatgatcgtggccggtttctctgcctactctcag
gttattgactggtcgaagttccgtgcgattgccgattctgtcggtgcttacctgtttgtc
gatatggcgcacgttgccggtctgattgctggtggtcaatatccgaatccggttccattc
gctgacgttgtcaccacaacgactcacaagacgcttcgcggtccgcgcggtggtctgatt
ctgtgcaagtctaacccggatcttgaaaagaaactgaactcggcgattttcccgggcggt
cagggtggtcctctggttcacgttatggcggctaaggcggtagcctttaaagagtgtctg
gaaccttcatggaaagattactgcgttaacgtaatcaaaaatgccaaagcaatggcggaa
gtctttaaggcgcgcggttgcgatgtggtttccggcgggactgaaaaccacctgttcctg
gttagcctgattgaaaaaggtctgaccggtaagctggttgatgcggctctggatgcggcg
catatcacgatcaacaagaactcggttcctaacgatcctatgtctccattcgtaacttcc
ggtatccgtgtcggtaccgctgcggcaactactcgcggtttcgatgtggaagactgtacc
aaccttgcaacctggatgtgtgatgtcatcgacgcgtgtgatcagtctagcgagagctgg
gatgaaagcgtggttgcagaggtacgtgaaaaagtttctgcactttgcgcagccaagccg
gtttataaataa
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