Thiomicrorhabdus xiamenensis: HQN79_08015
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Entry
HQN79_08015 CDS
T07160
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
txa
Thiomicrorhabdus xiamenensis
Pathway
txa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HQN79_08015 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
txa01007
]
HQN79_08015 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
txa03016
]
HQN79_08015 (serS)
Enzymes [BR:
txa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
HQN79_08015 (serS)
Amino acid related enzymes [BR:
txa01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HQN79_08015 (serS)
Transfer RNA biogenesis [BR:
txa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HQN79_08015 (serS)
Prokaryotic type
HQN79_08015 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
VSG_B
Crescentin
COG6_N
Hom_end_hint
Rop-like
Allexi_40kDa
BLOC1_2
Takusan
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
QKI89514
UniProt:
A0A7D4NLT5
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All DBs
Position
complement(1736674..1737960)
Genome browser
AA seq
428 aa
AA seq
DB search
MLDPKRLRSDLANVAAQLKTRGYELDVAQIEALEAQRKEWQVKAQDLQALRNSRSKEIGK
AKAQGQDIAPLLEEIEDLKTQLEQAEQKADEVQMQLDDILAGVPNTPHESVPVGNSEDDN
VEIRKWGEPRQFDFDVKDHVDLAEARGWFDNDAAVKITSSRFSVLKGSMARLQRALIQFM
LDQHANAGYEEVYVPFMVNQDSLRGTGQLPKFEADLYKISKNEEHDTNDRDLYLIPTAEV
PVTNLFRDEIIEEDQLPRKCVAHTPCFRSEAGSYGRDTRGLIRQHQFEKVELVQLVHPEK
SHEALEELTAQAESILQKLELPYRVVTLCTGDIGFSSAKTYDLEVWLPGQEAYREISSCS
NFEDFQARRLKARFRGAKGKPQLVHTLNGSGLAVGRTLVAILENYQNADGSITVPMALRP
YLGGTETL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgttagatccgaaacgtttaagaagtgatttggcgaatgtcgccgcacagctgaaaacc
cgcggctatgaattggatgtcgcgcagattgaagcgctggaagcacagcgtaaagagtgg
caggttaaagcccaggatctacaggcacttagaaacagtcgttccaaagagatcggtaaa
gccaaggcgcaagggcaggatattgcaccgcttttggaggaaatcgaagatcttaaaact
cagcttgagcaagccgaacagaaggcggatgaagttcagatgcaactggatgatattcta
gctggtgttccgaatactccgcatgaatcggttccggtcggtaattctgaagacgataat
gtcgaaattcgtaaatggggtgaaccgcgtcaatttgatttcgatgttaaagatcatgtt
gatttggccgaggcacgtggttggttcgataatgatgcagcggttaaaatcacctcttcc
cgtttctcggtgctgaaaggttctatggctcgtctgcaacgcgctttgatccaatttatg
cttgatcagcatgccaatgccggttacgaagaagtttatgtgccgtttatggtcaatcag
gacagtttgcgtggaaccggtcagctaccgaaattcgaagccgatctttataagatcagc
aaaaacgaagaacacgataccaatgaccgcgatctttatctgattccgaccgccgaagta
ccggtaaccaatctgttccgcgatgaaattatcgaagaagatcagttgccgcgtaaatgt
gttgcgcacactccgtgtttccgttccgaagcgggatcctacgggcgtgatacgcgcggt
ctgatccgtcagcaccagttcgagaaggtcgagctggtacaactggtacatcccgagaag
tcgcacgaggctttggaagagttaaccgctcaggcggaaagcattttgcagaagcttgaa
ctgccgtaccgtgtcgtcactctgtgtaccggcgatatcggattctcgtcggcgaaaacc
tacgatttggaagtctggctgccggggcaggaagcttaccgtgaaatttcgtcctgctcg
aatttcgaagatttccaggcgcgtcgtttgaaagcacgttttcgtggtgctaaaggcaag
ccgcaactggtgcatacattgaacggttccggtttggctgtgggtcgtaccttggttgcc
attctggaaaattaccagaatgcggatggttctattacggtaccgatggcgcttcgtcca
tatttaggcggaactgaaacactgtaa
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