Thiomicrorhabdus xiamenensis: HQN79_08235
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Entry
HQN79_08235 CDS
T07160
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
txa
Thiomicrorhabdus xiamenensis
Pathway
txa02020
Two-component system
txa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HQN79_08235
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HQN79_08235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
txa02022
]
HQN79_08235
02035 Bacterial motility proteins [BR:
txa02035
]
HQN79_08235
Two-component system [BR:
txa02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
HQN79_08235
Bacterial motility proteins [BR:
txa02035
]
Flagellar system
Flagellar assembly proteins
Others
HQN79_08235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
Mg_chelatase
AAA_2
AAA
AAA_16
HTH_11
AAA_3
HTH_24
FleQ
HTH_20
nSTAND3
HTH_28
MTA_R1
AAA_22
HTH_DeoR
HTH_1
Motif
Other DBs
NCBI-ProteinID:
QKI89553
UniProt:
A0A7D4NPC8
LinkDB
All DBs
Position
complement(1779287..1780747)
Genome browser
AA seq
486 aa
AA seq
DB search
MSIAKILVVEDDAELQEALVDILTINHFDVLAVSSAEEALKALDDEIGMVFSDIRMDGMD
GYTLMKRIRAFKPYLPIVLMTAYGTVEQAVEAMKYGAVDYIEKPFEAKVLVEKAQAYFNR
DASSEDDFVAADPATIQLKMMAKKVAQSDASVYISGASGTGKEVLARYIHAQSGRARQPF
VAINCAAIPENMLEATLFGYEKGSFTGAYKAMPGKFEQAQGGTLFLDEIGEMKADLQAKL
LRVLQEREVERIGSTKPLQLDVRVLSASNIDMKSAIREGGFREDLYYRLNVFPMRLPTLK
ERPKDIAAIAERLIQRHCGLSRVQPMISAPAMKRLLQYGWPGNIRELDNVIQRALLMMTG
DTIKESDILLDDGMDITLSLSGESETVVPDNSSDASSEQFSDVESREAETHPREAFVRND
EAEFTETSFFEEALPVDLKAREMQLILQTLKQFSGHRQKTAEALNISPRTLRYKIAKLKE
QGVEVP
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagtattgcgaaaattctggtggttgaagacgatgccgaactgcaggaggcactggtc
gacattctgaccatcaatcacttcgacgtccttgcggtcagtagtgccgaagaagcgctg
aaagctttggatgatgaaatcggcatggttttcagtgatatccgtatggacggcatggat
ggctatacgttgatgaagcggatccgagccttcaagccttatttaccgattgtactgatg
accgcctacggtactgtagagcaggcggttgaagcgatgaaatacggcgcggtcgactat
atcgaaaaaccgtttgaagccaaagtgctggtagaaaaggctcaggcgtatttcaaccgc
gatgcgtcaagcgaagacgattttgtggctgccgatccggcgacgattcagctgaaaatg
atggcaaaaaaagtggctcagagcgatgccagtgtctatatcagcggagccagcggtacc
ggtaaggaagtgttagcacgctatattcatgctcagtccggacgtgcacgacagccgttt
gttgctataaactgcgctgccattccggaaaatatgcttgaagccacactgttcggttat
gaaaaaggttcctttaccggcgcttataaagccatgccggggaagttcgagcaggcgcag
ggcggaaccttgtttctggatgaaattggtgagatgaaggccgacctgcaggctaaatta
ttgcgagtgttgcaggaaagggaagtggagcgtatcggtagtactaagccactgcagttg
gacgttcgtgtgttaagcgcctccaatatcgatatgaaaagcgcaattcgtgaaggcggt
ttccgtgaagacctgtattatcgcttgaatgtctttccgatgcgtctgccgacgcttaaa
gaacgtccgaaagacattgcggcgattgccgagcgtcttattcaacgacactgcggtttg
agccgagtgcaaccgatgatttccgcgccggctatgaagcgtttactgcagtacggctgg
ccaggcaatattcgtgagttggataatgttattcagcgcgctttgctcatgatgaccggt
gacaccattaaagagagcgatatcctgttggatgacggaatggatatcactttaagtttg
agcggcgaaagcgaaacggttgtaccggataattcatccgacgcatcttcggaacagttc
agcgatgttgaaagtcgagaggctgaaacgcatccgcgtgaggcgtttgtgcgtaatgat
gaagcggaatttaccgaaaccagtttttttgaagaagccttgcctgtcgatcttaaagcg
cgggaaatgcaactgatactgcaaacccttaagcagttttccgggcaccgtcaaaaaact
gccgaggcgctcaatatcagtccgcgaaccctgcgttataaaatagctaagcttaaggag
cagggggttgaagttccttaa
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