Thiomicrorhabdus xiamenensis: HQN79_10565
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Entry
HQN79_10565 CDS
T07160
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
txa
Thiomicrorhabdus xiamenensis
Pathway
txa00330
Arginine and proline metabolism
txa00480
Glutathione metabolism
txa01100
Metabolic pathways
txa01110
Biosynthesis of secondary metabolites
txa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
HQN79_10565
09106 Metabolism of other amino acids
00480 Glutathione metabolism
HQN79_10565
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
HQN79_10565
Enzymes [BR:
txa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
HQN79_10565
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
XdhC_CoxI
Motif
Other DBs
NCBI-ProteinID:
QKI89981
UniProt:
A0A7D4SNZ2
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Position
complement(2282668..2283867)
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AA seq
399 aa
AA seq
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MDTQDIIQHFAEQTHPDELEQFDRASLQELVAKHETPFMVLDLEEVDYQFKSLQAALPNT
KLFYALKSLSHPELIKRLKKLGSYFDLATIGEVELVESLGITGDQCIHTHPIKKDKEIKR
ALEFGCTRFVVDNFAEMQKFYPYAGQVELIIRVSFRSPQAVVDLSRKFGCTLEELPRLVD
DAAAHGISVVGLSFHVGSQSMSPMTHVNAVRSSVAAMKVMSHVDWKFLDIGGGFPIVYQE
SVSPIADFCVPINEALAELPQGVDVFAEPGRFISGPAMIEVVSVVGKAKRGARMWYYLDD
GVYGGFSGQMFDHAAYPIAPLKPFDPTGEFFPSVLAGPTCDSIDVVAEDIELPELEVGDI
LIGKQMGAYTIASATEFNYYPKPKVVVVEDIFDPESEAL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggacactcaagatattattcagcactttgctgaacaaacccaccctgatgaactggaa
cagtttgaccgcgccagcctgcaagagttggtcgccaagcatgaaacaccgtttatggtg
ctggacttggaggaagtcgattatcagttcaaatcactgcaagcggctctgccgaacacc
aagctgttttacgctctaaagtcgctttcgcatccggagctgatcaagcgtctgaagaaa
ctgggttcttattttgatctggcgaccattggtgaagtggagctggtcgaatccctgggg
attaccggcgatcagtgtattcatacccacccgattaaaaaagacaaagagatcaaacgc
gctttggagttcggctgtacccgttttgtggtcgataacttcgccgagatgcagaagttc
tatccatatgccggacaagtcgaactgattattcgtgtcagtttccgcagtccgcaggcg
gtggttgatctgtcgcgtaaattcggctgtacgctggaagaactgcctcgtctggtggat
gatgcggcggctcacggtatcagtgtcgttggtctgtctttccacgtcggttcgcagtcg
atgtcgccgatgacacatgtcaatgcggttcgttccagtgtcgcagcgatgaaagtgatg
agtcatgtggactggaaattcctggatatcggcggcggctttccgattgtctatcaggag
tcggtgtctccgattgcagatttctgtgtgccgattaacgaagcattggctgaactccca
caaggcgttgacgtgtttgccgaaccgggacgttttatctccggcccggcaatgatcgaa
gtggtctctgtggtcggtaaagcaaaacgcggcgcgcgtatgtggtattacctggatgac
ggagtttacggtggtttcagtggtcagatgtttgaccatgccgcttatccgatcgctccg
ttaaagccgtttgacccgaccggtgagttcttcccgagcgtactggcgggcccgacctgc
gactcgatcgatgtggttgccgaagatatcgagctgcctgagctggaggttggcgatatt
ctgatcggtaagcagatgggggcctacactattgcatcggctaccgagttcaactactat
cctaagccgaaagtggtcgtggtcgaagatattttcgacccggaaagcgaagcactctaa
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