Thiomicrorhabdus xiamenensis: HQN79_11025
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Entry
HQN79_11025 CDS
T07160
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
txa
Thiomicrorhabdus xiamenensis
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
txa03016
]
HQN79_11025
Enzymes [BR:
txa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HQN79_11025
Transfer RNA biogenesis [BR:
txa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HQN79_11025
Prokaryotic type
HQN79_11025
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QKI90070
UniProt:
A0A7D4NS23
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Position
complement(2384674..2385816)
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AA seq
380 aa
AA seq
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MSKPTIDQADFSRLAYAISPPQLQAVFKEQPEDFQVQEMNPYTLSGEGEHLWLYLQKTGE
NSEWLAKEIARWAGVSRSAVGMAGQKDRHAVTRQWLSVHLPGKSDPDWSVWPHPQVQLIK
STRHNRKLQKGGLSGNRFIIRLRDLQSFAEQDPGKIIDELTARLETVKSEGVPNYFGPQR
FGKNGNNIPKALQMLEGGQRVPRHKKSLYLSALRSWAFNCYVSERIEQGNWSRYLAGDVF
QLEGSSRCFADDGSDNLPQRLEEGDIHPAGMLIGRMNAKTLLPEKAAVEVYQRWIEAFNA
WREGLDKLGVQADYRALRLMPQELQWQWLPVNSQSGEQRLDLQLEFILPAGAFATMVLRE
LLIAKEPLRVYNDSEQSAGA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagccaacgattgaccaagccgatttttcccggctcgcctacgcgatttcgcct
ccgcaactgcaggcggtttttaaagaacagccagaggatttccaggttcaggaaatgaat
ccttacaccctgagtggtgaaggcgagcatctgtggctctatctgcagaaaaccggtgag
aacagcgaatggctggccaaagaaatcgccagatgggcaggtgtatcccgctcagcggtc
ggtatggccggacagaaggatcgacatgccgttacccgacagtggctcagtgtgcatttg
ccaggcaaaagcgatccggattggagtgtgtggccgcatccccaggtgcaattgattaaa
tccacgcggcataatcgcaagttgcaaaaaggcgggctgagcggtaatcgttttattatt
cgcttgcgtgatcttcaatcgtttgccgagcaggacccggggaagattatcgatgagctg
accgctcgtctggaaaccgttaagtccgaaggcgtcccaaactatttcggcccgcagcga
tttggcaagaacggtaataatattcccaaagcgttgcaaatgcttgaaggcgggcagaga
gtgcccagacataagaagagcctctatctttcagcactgcggtcatgggcatttaactgt
tatgtcagcgaacgcatcgaacaaggaaactggagccgctatctggcgggggatgttttt
cagcttgagggatccagtcgctgttttgcggatgacggctcggacaatctgccgcaacgc
cttgaagagggcgatattcacccggcggggatgttaattggtcgaatgaacgcaaaaacg
ttgcttccggaaaaagccgctgttgaagtttatcagcgctggattgaggcgtttaatgca
tggcgggaagggcttgataaactcggtgtacaagcggattatcgtgctctgcgtctgatg
ccgcaggagcttcagtggcagtggctgccggttaattcgcaaagcggtgaacaaaggctg
gacctgcagttggaatttattcttccggccggagcctttgccaccatggttctgcgcgag
ttattgattgccaaagaacctcttcgcgtctataacgacagcgaacaatctgccggggct
taa
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