Thiomicrorhabdus xiamenensis: HQN79_11155
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Entry
HQN79_11155 CDS
T07160
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
txa
Thiomicrorhabdus xiamenensis
Pathway
txa03420
Nucleotide excision repair
txa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HQN79_11155 (uvrD)
03430 Mismatch repair
HQN79_11155 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
txa03400
]
HQN79_11155 (uvrD)
Enzymes [BR:
txa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HQN79_11155 (uvrD)
DNA repair and recombination proteins [BR:
txa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HQN79_11155 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HQN79_11155 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
QKI90090
UniProt:
A0A7D4NS28
LinkDB
All DBs
Position
complement(2415862..2418120)
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AA seq
752 aa
AA seq
DB search
MDISFILDDLNDAQRQAVTLDESHGLILAGAGSGKTRVLVHRIAWLTKVMGYSPYNILAV
TFTNKAANEMRGRVENLIGQQAGGLTMGTFHGIAYRILRQHYQDANLPNNFQILDADDQK
RVLKRLLKAMELDEAQWPVKQVQAFINGEKEEGRRPHHIEIGHNPYVAKLVEIYKEYEEL
CQRGGLVDFAELLLRAHELWLKKPHILGHYQARFRHILVDEFQDTNTLQYAWLRVLAGAS
GKLFVVGDDDQSIYGWRGARVENIRQFDQDFAGTLMVRLEQNYRSTGTILKAANALISHN
DSRMGKQLWSAGEEGDPILLYEAFNEFDEARYVTSQIENWVEQGGQRDEVAVLYRSNAQS
RMIEQALMQAQIPYRVYGGLRFYDRAEVKDVLAYLRLVVNREDDAAFERVYNHPPRGIGQ
KTADSIRQVARDQQISLWQASQMLLENSLKARAKTAVQGFIDLIEQLQDALHAQDLEQQF
VKTISLSGLQAHFEKDQSEQGQGRLENLDELISAAAQFDNRAKQQTAAGINTEESVMAAE
DESVRLDGTTLIDNPEQSTLEEFLAQSALEAGEQQADAWESCVQLMTMHSAKGLEFPLVF
MIGMEEGLFPSQQSQEDASRLEEERRLAYVGITRAEKQLIMTFAQRRRLHGSEFFPVMSR
FIKEIPPEYIQEVRLSGRVQPTMEREGSAGFTSSARQNETGFQIGERVSHAKFGDGIVLN
YEGSGEHARIHVNFTEFGSKWLVLAYARLEKR
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggatatctcctttattttagatgatttaaacgatgcccagcgtcaagcggtgacgctg
gatgaaagtcacggtttgattctggccggagccggcagcggaaaaacgcgggtgttggtg
catcgcatcgcctggctgaccaaagtcatggggtactcgccgtacaatattctggcggtg
acctttaccaataaagccgccaacgaaatgcgcgggcgtgttgaaaacctgatcgggcag
caggccggcggcttgacgatgggaacctttcatggcattgcgtatagaattttgcgtcag
cattaccaagatgcgaatctgccgaataatttccagattctcgatgccgacgatcagaag
cgcgttttgaaacggcttttgaaagcaatggaattggacgaggcgcaatggccggtcaag
caggtgcaggcttttattaacggtgaaaaagaagaagggcgacgcccgcatcatatcgaa
atcggtcataacccttatgtcgccaaactggtcgaaatctataaggagtatgaagagctc
tgccagcgcggcggtctggtggattttgccgaattgctgttgcgcgcgcatgagctgtgg
ctgaagaaaccgcatattctcggtcattaccaggcgcgcttccgtcacattctggtcgac
gagtttcaggacactaatacccttcagtacgcctggctgcgtgtcttggctggcgccagc
ggtaaattgtttgtcgtcggcgacgatgatcagtcgatctacggttggcgcggagcgcgg
gtggaaaatatccgtcagttcgatcaggattttgccggcacgctgatggtgcgtctggag
cagaattatcgttcgaccggtacgattctgaaagcggccaatgcgctgatttcgcataac
gacagccgtatggggaaacagttatggagtgccggcgaagaaggggacccgatccttcta
tatgaggcgtttaacgagtttgacgaggcgcgttatgtcacctcacagatcgaaaactgg
gttgaacagggcggtcagcgtgatgaagtcgcggttttgtaccgttccaacgcacaatcg
cgaatgatcgagcaggcgctgatgcaggcgcagattccgtaccgtgtttatggcggcttg
cgcttctatgaccgggctgaagtcaaagacgtactggcgtatttgcgtctggtggtgaat
cgcgaagacgatgctgccttcgagcgggtctacaaccatccgccgcgcggtatcggtcag
aaaaccgccgattcgatccggcaggtggctcgcgatcagcagatttcgctgtggcaggct
tctcagatgctgcttgagaacagtttgaaagcacgagccaagacggcggttcaagggttt
attgatctgatcgagcagctacaggatgccttgcacgcacaggatcttgaacaacagttc
gttaaaaccatttcgctgtccgggttgcaggcgcactttgaaaaggatcaatccgagcag
ggacaggggcgattggaaaaccttgatgaattaatcagcgccgccgcgcaattcgataat
cgcgccaaacagcagacggctgccggaatcaataccgaagaatcggttatggcggccgag
gatgagtctgtccgactggacggcacgacccttattgataatccggaacagagtactctg
gaagagtttctggcacagtcagcattggaagcgggcgaacagcaggcagatgcctgggag
tcctgtgtgcagctgatgacaatgcactcggccaaggggttggagtttccgttggtattt
atgatcggcatggaagaagggctcttcccgtcgcagcagtcgcaggaagatgcttcgcgt
ctcgaagaagagcgtcgtctggcctatgtcggtattacccgtgccgagaaacagctgatt
atgaccttcgctcaacgccgccgtttgcacggttccgagttttttccggtgatgtcgcgc
tttatcaaagagattccgccggagtatattcaggaagtgcgtctttccggacgcgtgcaa
ccgacgatggagcgtgaaggttcggccggttttacttcgagtgcaagacagaatgagacc
ggttttcagattggagaacgggtcagtcacgctaaattcggggacggtatcgtgctgaat
tacgaaggcagcggcgagcatgcgcggattcatgtgaatttcaccgagttcggcagcaag
tggctggtattggcctatgcccgcctggaaaaacgctag
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