Thalassospira xiamenensis: TH3_00020
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Entry
TH3_00020 CDS
T03639
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
txi
Thalassospira xiamenensis
Brite
KEGG Orthology (KO) [BR:
txi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
txi03032
]
TH3_00020
03400 DNA repair and recombination proteins [BR:
txi03400
]
TH3_00020
Enzymes [BR:
txi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TH3_00020
DNA replication proteins [BR:
txi03032
]
Prokaryotic type
DNA Topoisomerases
TH3_00020
DNA repair and recombination proteins [BR:
txi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TH3_00020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
Toprim_4
HATPase_c_3
DUF1690
Motif
Other DBs
NCBI-ProteinID:
AJD50130
UniProt:
A0AB72U6G5
LinkDB
All DBs
Position
4316..6775
Genome browser
AA seq
819 aa
AA seq
DB search
MTNETEAPKTAEQQAQDYGAESIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMIYEVVDNA
IDEALGGYCDTVWVQLNGDGSATIRDNGRGIPTDLHKEEGVSAAEVIMTQLHAGGKFDQN
SYKVSGGLHGVGVSVVNALSTLLKLRIWRNGKEHYMEFSGGDAIKPLEIVGDAPMTAEGK
PLTGTEVTFYPDAEIFTMTEFNLPTLEHRLRELAFLNSGVILTLRDERHGEPVETKLHYE
GGIRAFVEYLDRNKTPQIEEPIAIVGEKDGITVEVSLQWNDSYHETTLCFTNNIPQRDGG
THMAGFRAALTRQINSYAQESGIVKKEKVSLSGDDAREGLTCVISVKVPDPKFSSQTKDK
LVSSEVRPVVENIVNDRLQQWLEEHPQDARKIVTKVVEAASAREAARKARELTRRKGALD
ISSLPGKLADCQERDASKAELFIVEGDSAGGSAKQGRERGFQAILPLRGKILNVERARFD
KMLSSQEIGTLITALGTGIGRDDFNIEKTRYHKIIIMTDADVDGAHIRTLLLTFFYRQMP
ELVERGYLYIAQPPLYRAKRGNSVQYLKDDREMEQYLTAQGTEDALLTLNGGVQVAGSDL
VRIVELARKAKGLLEPLSLKLPISILEQAVLAGALNPALLDDDAKRQEAANTLAGRLDLL
SEDFDRGWKGEASQDEIVMWRMLRGVEERHVIDGNILRSAESRAIAGLLVELRELFENGA
EFGAKDKIWKINGPVDLVNAVMEYGRRGISIQRYKGLGEMNPDQLWETTLDPNVRSLLQV
RVDHADEAEEVFSTLMGDVVEPRRDFIQSNALKVANLDV
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgaaacagaagctccgaaaaccgccgaacagcaggcgcaggattacggtgca
gaatcgatcaaggttcttaagggccttgaagcggtgcgtaaacgcccgggcatgtatatc
ggcgataccgatgacggcagtggcttgcaccacatgatctatgaagtcgtcgataacgcg
attgacgaggcactgggcgggtattgtgatactgtctgggtgcagttgaacggtgatggg
tcggcaacgatccgcgataacggccgtggcatcccgaccgatctgcacaaggaagaaggc
gtttctgcagccgaggtcatcatgacccagctgcatgccggcggtaagtttgaccagaac
tcctataaggtttctggcggtctgcatggcgtgggtgtgtcggttgtgaacgccctgtcg
actttgctgaaactgcgcatctggcgtaatggcaaggagcattacatggaattctccggt
ggcgatgcgatcaagccgctggaaattgttggtgatgcgccgatgacggcagagggcaag
ccgctgaccgggaccgaagttaccttctatcccgatgccgaaatcttcacgatgaccgag
ttcaacctgccgacgcttgaacatcgtctgcgcgaactggctttcctgaactctggcgtg
atcctgacgctgcgtgatgaacgccatggcgagccggttgaaaccaagctgcattacgaa
ggtggcattcgtgcttttgtcgaatatctcgatcgtaacaagacaccgcagattgaggag
ccaatcgccattgtgggtgaaaaagacggtattaccgttgaagtttccctgcagtggaat
gacagctatcacgaaaccacgctgtgctttaccaacaatattccgcagcgtgatggcgga
acccacatggccggtttccgtgcggctctgacccgtcagatcaactcctatgcgcaggaa
agcggaattgtgaaaaaggaaaaggtcagtctttcgggggatgatgcccgggaaggcctg
acctgtgtgatttcggtcaaggtaccggatccgaaattctcatcccagaccaaggataaa
ctggtttcatccgaagtccgtccggtcgtcgagaacatcgtgaacgacaggcttcagcaa
tggctggaagaacatccgcaggatgcacgcaaaatcgtcaccaaggttgtcgaagccgcg
tcggcccgcgaagcggcgcgcaaggcacgtgaactgacccgtcgtaaaggtgcgcttgat
atttcatcccttccgggcaagcttgccgattgtcaggaacgcgatgcgtccaaagccgaa
ctgttcatcgtggagggtgattccgcaggtggatcggccaaacagggccgtgaacgtggc
ttccaggcaatcctgccattgcgtggtaaaatcctgaacgttgagcgcgcgcgtttcgat
aaaatgctttcaagtcaggaaatcggtacgctgattaccgcccttggcaccgggattggc
cgcgatgatttcaatattgaaaaaacgcgctaccacaaaatcatcatcatgactgacgcc
gacgtcgatggcgcgcatatccgaaccctgcttctgaccttcttctatcgtcagatgcct
gaattggttgaacggggatatctctatatcgcacaaccaccgctttatcgcgccaagcga
ggtaactcggtccagtacctcaaggatgaccgcgagatggaacagtacctgaccgcacaa
gggaccgaagatgcgttgctgacgctcaatggcggcgtgcaggttgctggttcggatctg
gtgcggattgtggaactggcgcgcaaggccaagggactgctggagccgctttcgctgaaa
ttgccgatttcgattctcgaacaggccgtactggcgggtgccctgaacccggcattgctt
gacgatgatgccaaacgtcaggaagcggcgaatacgcttgctggtcgtcttgatcttctg
tccgaagattttgatcgcggatggaagggcgaagcatcgcaggatgaaatcgtcatgtgg
cgtatgctgcgcggtgtcgaagaacgtcacgtcattgatggcaatatcctgcgttcggcc
gaaagccgtgcgattgccgggttgctcgttgaacttcgcgaattgttcgaaaatggtgct
gaattcggtgccaaggacaagatctggaaaatcaatggtccggtcgatctggtcaacgcg
gtaatggaatatggtcgtcgcggaatttcgatccagcgctataaaggtctgggcgaaatg
aaccccgatcagctttgggaaaccacccttgatccgaatgtccgttcgctccttcaggtg
cgtgttgatcatgcagatgaggccgaggaagtcttctcgaccctgatgggtgacgtcgtt
gaaccgcgtcgtgacttcatccagtcgaatgctctcaaggttgctaatctagacgtctga
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