Thalassospira xiamenensis: TH3_11910
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Entry
TH3_11910 CDS
T03639
Name
(GenBank) Ada metal-binding domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
txi
Thalassospira xiamenensis
Pathway
txi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
txi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TH3_11910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
txi03000
]
TH3_11910
03400 DNA repair and recombination proteins [BR:
txi03400
]
TH3_11910
Enzymes [BR:
txi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
TH3_11910
Transcription factors [BR:
txi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
TH3_11910
DNA repair and recombination proteins [BR:
txi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TH3_11910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
TetR_N
HTH_Tnp_ISL3
HTH_3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AJD52498
UniProt:
A0AB72UEH4
LinkDB
All DBs
Position
complement(2555483..2557012)
Genome browser
AA seq
509 aa
AA seq
DB search
MEQLNDDICYHALKARDRRFDGRFYTAVLTTGIFCRPICPAVTPKRVNVQFYPSAEAAIA
HGFRPCLRCRPEAAPGSPASAGVHATVARAVRLIEEGALETGSVEQLADRLGVGDRHLRR
IFKEHTGVTPQDHAKARRLLRARQLIVDSNLSMTEIADIAGFGSLRRFNDAMKTAYGHAP
TAFRRGIKAEPVSDKNDNDPFAPKSDDLILRLRARQPFDADYLLTFFRARAIPGLEAVGD
RTYARGFRIHDAVGLMICRFASDQGGVDVILRGPARDAVLEIGGRVRRLFDLDADVPSIT
ALFADDELLRPLVDKRPGLRVPGCWDRFELAIRAVLGQQVSVAAARTLAGRLVARFGEVL
PENLIAGTGITHLFPKPATMQEQELISIGLTTRRAQTLADIIDLFADPQCDRQSGDDILA
AMTATKGIGPWTLNYFGLRGLGDPDAFPAADLGILKASEIGGGPAKPKPLEQHAERWRPW
RAYAAQYLWSALEQEHAPKPKPQPPRKGK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggaacagctcaatgacgatatctgctatcacgcattaaaggcccgggatcgccggttt
gacggtcggttttacaccgccgttctgaccaccgggattttctgccgtccgatatgcccg
gccgtcacgccaaagcgcgtgaatgtgcaattttatcccagtgccgaggcggcaattgcc
cacgggttccgcccgtgcctgcgctgccgccccgaagccgcccccggatcaccggccagt
gccggggttcacgccaccgttgcccgtgcggtaaggctgatcgaagaaggcgcccttgaa
accggatcggtcgaacagcttgccgaccggcttggcgtcggagatcgtcatctgcgccgt
attttcaaggaacataccggcgtcaccccgcaggatcatgccaaggcaaggcgtctgctg
cgtgcccggcaactgattgtcgacagcaacctgtcgatgacggaaatcgccgatattgcc
gggttcggcagtttgcgccggttcaatgacgccatgaaaaccgcctatggccacgcacca
accgcgttccggcgcggcataaaggccgaacccgtgtcagataaaaacgataatgatccc
ttcgcgcccaaaagcgacgatctgatcctgcgcctgcgcgcccgccaaccctttgatgcc
gactaccttctgacattcttccgggcacgcgccattccggggctggaggcggtgggcgac
cgcacctatgcccgcggctttcgcatccatgatgccgtcggtctgatgatttgccggttt
gcgagcgatcagggcggggtggacgtcatcctgcgcggtccggcgcgtgacgccgtgctt
gaaatcgggggccgggtgcggcggttgtttgatctggatgccgatgtgccctcaatcacg
gcgctgtttgccgatgatgaattgctgcgcccgctggtcgataaacgcccgggcttgcgt
gtgcccggatgctgggaccggttcgaactggcgatccgggcggtactgggtcaacaggtt
tcggttgccgccgcccgtaccttggccgggcgactggtggcccgctttggcgaggttttg
cctgaaaacctgattgccggaaccggcatcacccatctgtttccgaaacccgcaaccatg
caggaacaggaattgatatcaatcgggcttacgacccgccgcgcccagacacttgccgat
atcatcgatctgtttgccgatccgcaatgtgaccgacaatcgggcgatgacatcctggcg
gcaatgaccgcgaccaaggggatcggcccgtggacgttgaattatttcggcctgcgcggg
cttggcgatccggatgccttcccggcggctgatcttggcatcctgaaggcatctgaaatc
ggtgggggaccagcaaagcccaaaccattggaacagcatgccgaacgctggcgtccgtgg
cgtgcctatgccgcgcaatatctgtggtcggcacttgaacaggaacatgcgccaaagcca
aagccccagcctccaaggaaagggaaatga
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