Thalassospira xiamenensis: TH3_12350
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Entry
TH3_12350 CDS
T03639
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
txi
Thalassospira xiamenensis
Brite
KEGG Orthology (KO) [BR:
txi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
txi03400
]
TH3_12350
DNA repair and recombination proteins [BR:
txi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TH3_12350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
Lon_C
DnaB_C
GvpD_P-loop
AAA_22
AAA_24
SLFN-g3_helicase
AAA_16
AAA
CobU
Zn_ribbon_Thio2
ADK_lid
NTPase_1
AAA_14
CBM_25
DZR
AAA_18
AAA_5
nSTAND_NTPase5
AAA_19
DUF7129
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
AJD52586
UniProt:
A0AB72UE63
LinkDB
All DBs
Position
2656224..2657636
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AA seq
470 aa
AA seq
DB search
MAKTQSRFICQNCGAEYRKWTGRCDACGEWNSIEEERIEASPKATGGIATGSKGKQLDFV
ALEGESASPPRIITGIAELDRAVGGGLVPGSALLVGGDPGIGKSTILLQAVGVLSARHKC
AYISGEEAVDQVRMRAARLGLEKSKVDFAAATSLRDIIATLDQSSHEVVVIDSIQTMYAD
TLDSAPGTVSQVRACALELIRLAKRKGFAVILVGHVTKEGQIAGPRVLEHMVDTVLYFEG
ERGHQFRILRAVKNRFGATDEIGVFEMGDAGLVEVPNPSALFLADREAPVSGTAVFAGLE
GTRPMLVEIQALVAQSALATPRRAVVGWDSARMNMILAVLDARCGLPLSQFDVYLNVAGG
MRVGEPAADLAVAAALISAVADAPVPAETVIVGEVGLSGEVRPVGQIESRLKEAAKLGFV
NAYSPRTGGNGKKKITIKGLNQREIGHLQDLVNLFGDDVRDKVRPREGMY
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
gtggccaaaacccaaagtcgtttcatctgccagaattgcggtgcagaataccggaaatgg
accggacgttgcgatgcctgcggcgaatggaattcgatcgaggaagaacgcattgaagcc
agccccaaggcaaccggtggcatcgcgaccgggtcgaagggcaaacagcttgatttcgtc
gcccttgaaggtgaaagtgcaagcccgccccgcatcataaccggcattgccgaacttgat
cgtgcggttggtggcggccttgttcctggctctgcccttttggttggcggcgatcctggg
atcggtaaatcaacgatcctgttgcaggccgttggcgtcctgtcggccagacataaatgt
gcctatatctcgggcgaagaagcggttgatcaggtgcgcatgcgtgccgcccgtcttgga
cttgaaaaatcaaaggtcgattttgccgccgcaaccagtctgcgcgatatcatcgcgaca
ctggatcaaagttcacatgaagtcgtggtcatcgattccattcaaacgatgtatgccgat
acgctcgacagtgccccgggtaccgtatcgcaggtccgcgcctgtgcacttgaactgatc
cgccttgccaagcgcaagggttttgccgtgatccttgtcggtcacgtcaccaaggaaggc
cagattgccggtccccgtgttctggaacatatggtcgacacggttctatatttcgaaggc
gaacgcggccatcagttccgcattctgcgcgcggttaaaaaccgttttggtgcgaccgat
gaaattggcgtgtttgaaatgggcgatgcgggccttgtcgaagtcccgaacccgtccgcc
cttttccttgccgaccgtgaagccccggtatcgggcaccgccgtgtttgccgggcttgaa
ggcacccgcccgatgctggtggaaattcaggcgctggtcgcgcaatctgcactcgccacg
ccacgtcgggcggttgtcggctgggattcggcgcgtatgaacatgatccttgcggttctg
gatgcacgctgtggcttgccgcttagccagtttgacgtttacctgaacgttgccggtggc
atgcgcgtgggcgaacccgccgccgaccttgccgtggcggcagcccttatatctgccgtc
gcagatgcgccggttcctgccgaaaccgttattgtcggcgaagtcggcctttcgggcgaa
gtccgccctgtcggtcaaatcgaatcacgccttaaagaagccgccaaactcggctttgta
aatgcctatagcccgcgaaccggtggcaacggcaagaagaagatcacgatcaagggcctt
aaccagcgtgaaatcggccatcttcaggatttggtaaatctcttcggcgacgatgttcgt
gacaaggtgcgtccgcgcgaaggcatgtattga
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