Thalassospira xiamenensis: TH3_12455
Help
Entry
TH3_12455 CDS
T03639
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
txi
Thalassospira xiamenensis
Pathway
txi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
txi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TH3_12455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
txi03019
]
TH3_12455
03110 Chaperones and folding catalysts [BR:
txi03110
]
TH3_12455
03029 Mitochondrial biogenesis [BR:
txi03029
]
TH3_12455
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
txi04147
]
TH3_12455
Enzymes [BR:
txi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
TH3_12455
Messenger RNA biogenesis [BR:
txi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
TH3_12455
Chaperones and folding catalysts [BR:
txi03110
]
Heat shock proteins
HSP60 / Chaperonin
TH3_12455
Mitochondrial biogenesis [BR:
txi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
TH3_12455
Exosome [BR:
txi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TH3_12455
Exosomal proteins of other body fluids (saliva and urine)
TH3_12455
Exosomal proteins of breast cancer cells
TH3_12455
Exosomal proteins of colorectal cancer cells
TH3_12455
Exosomal proteins of bladder cancer cells
TH3_12455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AJD52607
UniProt:
A0AB72UEJ0
LinkDB
All DBs
Position
complement(2679726..2681381)
Genome browser
AA seq
551 aa
AA seq
DB search
MAAKEVKFSTDARAKMLRGVDILADAVKVTLGPKGRNVVIEKSFGAPRVTKDGVSVAKEI
ELSDKFENMGAQMLREVASKTADLAGDGTTTATVLAQAIVREGNKSVAAGMNPMDLKRGI
DLATTKVIEAIQSRARKVSGKDEIAQVGNISANGDREVGDMIAEAMEKVGNEGVITVEEA
KGLHTELDVVEGMQFDRGYLSPYFVTNPEKMVAELDNPYVLLFDKKVSSLQPLLPLLEAV
VQSGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGQV
VSEDLGIKLESVTLDMLGTAKSITITKEETTIVDGAGEKAQIEARVGQIRAQIEETTSDY
DREKLQERLAKLAGGVAVIKIGGASEIEVKERKDRVDDALHATRAAVEEGIVAGGGTALL
YATRALDGLEGVNHDQTIGVDIVRRALQAPVRQIAQNAGVDGAVVAGKLLEQDDVEFGFD
AQKGEYTNLVKAGIIDPAKVVRTALQDAASVAGLLITTECMIAEKPEDKSSGGAPDMGGM
GGMGGMGGMGF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagtaaaattctccaccgacgcccgcgccaaaatgctgcgcggtgtc
gacatccttgctgatgccgttaaagtgacgctcggcccgaaaggccgtaacgttgtcatc
gaaaaatcctttggcgcaccgcgcgtgaccaaggacggcgtttcggtcgccaaggaaatc
gaactttctgacaagttcgaaaacatgggcgcacagatgctgcgtgaagtggcttccaaa
accgccgatctggctggtgacggcaccaccaccgcaaccgttctggcacaggcaatcgtt
cgtgaaggcaacaagtccgttgctgctggcatgaacccgatggacctgaaacgcggtatt
gatcttgcgacgaccaaagtaatcgaagccatccagagccgcgctcgtaaagtttcgggc
aaggacgagattgcacaggttggtaacatttcggccaacggtgaccgtgaagtcggcgac
atgatcgctgaagccatggaaaaagttggcaacgaaggtgttatcaccgtcgaggaagcc
aagggcctgcacaccgaactcgacgttgtcgaaggcatgcagtttgatcgtggttacctg
tcgccgtacttcgtaaccaatccggaaaagatggttgccgagctcgacaacccttatgtt
ctgctgtttgacaaaaaggtttcctcgctgcagccgctgctgccgcttctggaagctgtc
gttcagtcgggcaagccgcttcttatcattgctgaagacgtcgaaggcgaagctcttgcg
accctcgtcgttaacaagctgcgcggtggtctgaaaatcgctgcagtcaaagcaccgggc
ttcggcgaccgtcgcaaagcaatgctcgaagacatcgccatccttaccggtggtcaggtt
gtctccgaagatctcggcatcaagcttgagagcgttacgctcgatatgctcggtaccgcg
aaatcgatcaccatcaccaaagaagaaaccaccatcgttgatggtgccggtgagaaagcc
cagatcgaagcccgcgttggccagatccgtgcacagatcgaagaaaccacttcggattac
gaccgcgagaaactgcaggaacgtcttgcgaaactcgctggcggtgttgccgtgatcaaa
atcggtggcgcttcggaaatcgaagtgaaagaacgcaaagaccgcgttgacgatgccctg
cacgcaactcgcgctgctgttgaagaaggtatcgttgctggtggcggtacggctctgctg
tacgcgacccgcgctcttgacggtcttgaaggtgtaaaccatgaccagaccatcggtgtc
gacatcgttcgtcgcgcgctgcaggctccggtccgtcagatcgctcagaacgcaggtgtt
gacggtgcagttgtcgctggcaagctgcttgagcaggacgatgttgaattcggcttcgac
gcacagaaaggtgaatacaccaacctggtcaaagccggcatcatcgacccggccaaagtt
gttcgtactgccctgcaggacgcagcatcggtcgcaggtctgctgatcaccaccgaatgc
atgatcgctgaaaagccggaagacaaatcctccggtggcgcgcctgacatgggcggcatg
ggtggtatgggcggcatgggcggtatgggcttctaa
DBGET
integrated database retrieval system
