Thalassospira xiamenensis: TH3_15180
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Entry
TH3_15180 CDS
T03639
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
txi
Thalassospira xiamenensis
Brite
KEGG Orthology (KO) [BR:
txi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
txi03400
]
TH3_15180
Enzymes [BR:
txi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
TH3_15180
DNA repair and recombination proteins [BR:
txi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
TH3_15180
Prokaryotic type
TH3_15180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AJD53142
UniProt:
A0AB72UG13
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Position
3319405..3320889
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AA seq
494 aa
AA seq
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MPSASAAPIAIMWFRNDLRLADNPALNASVKWAQQNNGIVLPVFILDRVIDAQLGGATRW
WLEKTLTRLDESLATVAGKKAPCLRVFRSDARDVFNQLQTDHKIGALFWNRLYDKASIAR
DADIKSSLRDQNIECESFNGQLLYEPWEVKTGAGSDFKVFSPFWRACLKLPPPAEPKKAP
ESIPLGDLQLSDEADIAGLDLSPKPFDWATGFADRFTPGEQGAMDQLHDFIDGRLSDYAD
LRDRPDHRVTSELSPHLRFGEISPRQVWHAANHYADAHPGQGKTASKFMAELGWREFAHH
ILFHARDLKSVPLQGQFTDFPWDDDPKALERWQRGQTGFPIVDAGMRELWHTGYMHNRVR
MIVGSVLVKHLLIHWREGLAWFDDTLVDACPANNPFSWQWIGGCGADAAPYFRIFNPVLQ
GEKFDPDGRYVRQWVPELSDMPAQYIHKPWEASPLILKAAGVDLGQSYPEPLIGIKEGRE
RALAAYQDMKRAAT
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcttctgccgcaccgattgccatcatgtggtttcgcaatgaccttcgtctt
gccgacaacccggcattgaacgccagcgtaaagtgggcacagcaaaataacggcatcgtg
cttccggtatttatccttgatcgggtgattgatgcccaattgggcggggcgacgcgctgg
tggctcgaaaaaaccctgacgcgtcttgatgaaagccttgcaacagtggccggaaaaaag
gccccctgtctgcgggttttcagatcggatgcgcgggacgttttcaatcagttgcaaact
gatcacaaaatcggcgcgcttttctggaaccggctttatgacaaggcgtccatcgcgcgc
gatgctgatatcaaatcatccttgcgcgatcagaatatcgaatgcgaaagcttcaatggt
caattgctgtatgaaccatgggaagtcaaaaccggggccggatcggacttcaaggttttc
agtccgttctggcgggcgtgtttgaaactgccacccccggcagaacccaaaaaagcccct
gaaagcatcccgcttggcgatctgcaactgagcgatgaagcagatattgccgggcttgat
ctgtcgcccaagccgtttgactgggccaccggctttgccgatcggttcacgccgggtgaa
cagggcgcgatggatcagctacatgactttattgatggcaggctttctgattacgccgac
ctgcgcgaccgacccgatcatcgggtgacgtcggaactgtccccgcatctgcggtttggc
gagatcagcccgcggcaggtgtggcacgcggcaaaccattacgccgacgcccatcccggc
caaggcaaaaccgcatcaaaatttatggccgaactgggttggcgggaatttgcccatcac
atcctgtttcatgccagggatttgaaatccgtgccgcttcaggggcaattcaccgatttc
ccgtgggatgatgatccaaaggcgcttgaacgctggcaacgcgggcaaaccggttttccg
attgtcgatgccggaatgcgggaactttggcataccggttatatgcataaccgggtgcgg
atgattgtcggatcggtactggtcaaacaccttctgatccattggcgcgaaggtctggca
tggtttgacgatacgcttgtcgatgcctgcccggccaataatccgttttcctggcaatgg
attgggggctgtggtgccgatgccgccccctatttccggattttcaatccggtcctgcaa
ggcgagaaatttgacccggacggccgttacgtccggcaatgggtcccggaactttccgat
atgcccgcgcaatatatccataagccgtgggaagcatccccgctgatcctgaaggccgca
ggggtggatttggggcagagctatcccgagcccctgatcggtatcaaagaaggccgtgag
cgggcgctggcggcttatcaggatatgaaacgagcagcgacctag
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