Thalassospira xiamenensis: TH3_17185
Help
Entry
TH3_17185 CDS
T03639
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
txi
Thalassospira xiamenensis
Pathway
txi00061
Fatty acid biosynthesis
txi00071
Fatty acid degradation
txi01100
Metabolic pathways
txi01212
Fatty acid metabolism
txi02024
Quorum sensing
txi04146
Peroxisome
Module
txi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
txi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TH3_17185
00071 Fatty acid degradation
TH3_17185
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TH3_17185
09145 Cellular community - prokaryotes
02024 Quorum sensing
TH3_17185
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
txi01004
]
TH3_17185
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
txi04147
]
TH3_17185
Enzymes [BR:
txi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TH3_17185
Lipid biosynthesis proteins [BR:
txi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TH3_17185
Exosome [BR:
txi04147
]
Exosomal proteins
Exosomal proteins of breast milk
TH3_17185
Exosomal proteins of breast cancer cells
TH3_17185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AJD53539
UniProt:
A0AB72UHE4
LinkDB
All DBs
Position
complement(3744976..3746925)
Genome browser
AA seq
649 aa
AA seq
DB search
MSSYTPEYANVQALDTFPKVLAYNARHWADEIAMREKEFGIWQEFTWKDYNDRVKWMALG
LRNMGIKPGDVIGVIGENRPEWVWGEIAAHALRAMSVGLYQDSLHEEVAYLITYSGARVL
IAEDEEQCDKLIELAEQIPTVEHIVYCDPRGMRKYDDPRLMDIEKLYELGREVEAKDPGA
YDVMVADTRGDECAILCTTSGTTSKPKMAMLNAGDFLDHCAAYLRADPKYPGDNYVSVLP
LPWIMEQVYVVGQSLISRQIVNFVEEQETMMADLREIGPNFVLLAPRVWESIAADVRARM
MDATLFKQKMYDFGMALARTALDGGGHSKVADVLLMNALKDRLGFSNLRSAATGGAAMGP
ETFKFFHAMGVPLRQLYGQTELCGAYTIHQPDDIDFDTVGRAFDNSEIKIINTDENGVGE
IVARTSGMFTSYYKNQSSYDEDVRDGWMHTGDAGYFKEGNKHLVVIDRLKDLAETSKGVR
YSPQFIENKLKFSPFIAEAVILGKGLPFLSTMICIRYSIMAKWAEQRGIAFTNYTNLSAQ
PQVYDMIIDEIRQVNETLPEAQRIKRFLLLYKELDADDGELTRTRKVRRSVVAEKYADII
DAVYAGNDKVDIDTMITFQDGSKTRIQTSVKVVDLDGDKAAETAPKAAE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctatacccctgaatatgccaatgtgcaggcgcttgatacctttccgaaggtg
ctggcgtataacgcgcgccactgggctgacgaaattgccatgcgcgaaaaggaattcggc
atctggcaggaattcacgtggaaagattataacgaccgcgtcaaatggatggcgcttggc
ctgcgcaatatgggaatcaagcccggtgacgtgattggcgttattggtgaaaaccggccg
gaatgggtctggggtgaaatcgctgcccatgcgctgcgtgcgatgtcggtcggtctgtat
caggacagccttcatgaagaagtcgcctatctgatcacttattccggtgcgcgtgttctg
atcgccgaagacgaggaacagtgcgacaagctgatcgaactggctgaacaaatcccgacg
gtcgaacatatcgtttactgcgatccgcgcgggatgcggaaatatgacgacccgcgcctg
atggatatcgaaaagctttatgaacttggccgcgaggtcgaggccaaagatcccggtgcc
tatgacgtgatggtggccgatacgcgcggtgatgaatgcgcgatcctgtgcaccacgtcg
ggcacgacgtccaagccgaaaatggcgatgctcaatgccggggatttcctggatcactgt
gcggcatatctgcgggccgacccgaaatatccgggcgacaattatgtttcggtcctgccg
ctgccgtggatcatggaacaggtttatgtcgtcggtcagtcgttgatcagccgccagatc
gtcaatttcgttgaagaacaggaaacgatgatggccgatcttcgcgagatcggaccgaat
tttgttctgctggcaccgcgcgtctgggagtcgattgccgccgatgtccgggcccgcatg
atggatgccaccctgttcaagcagaaaatgtatgatttcggcatggctttggcccgtacc
gcccttgatggtggggggcattccaaggtcgccgatgttctgttgatgaatgcgttaaag
gaccggttgggcttttccaatttgcggtctgctgcgaccggcggggcggcgatggggccg
gaaacctttaagttcttccatgccatgggtgttccgttgcgccagctttatggacagacc
gaactttgcggcgcctatacgatccatcagcccgatgacattgatttcgatacggtcggg
cgcgcgttcgataattcggaaatcaaaatcatcaataccgatgaaaacggagttggcgaa
attgtcgcgcgcacatcggggatgtttaccagctattataaaaaccagtcttcctatgac
gaggacgtccgggatggctggatgcatacgggtgatgccggatatttcaaggaaggcaac
aagcatctggtggtgattgatcgcctgaaggatctggcggaaacatcaaaaggcgtgcgg
tattcgccgcagtttattgaaaacaaactgaaattttcgcccttcattgccgaggccgtg
atccttggcaaagggttgccgttcctgtcgaccatgatctgcatccgttattcgatcatg
gccaaatgggccgagcagcgcggaattgcctttaccaactataccaatctttcggcccag
ccgcaggtctatgacatgatcattgatgaaatccgtcaggtgaatgaaaccctgccggaa
gcccagcgcatcaagcggttcctgctgctttacaaggaactggatgccgatgacggcgaa
ctgacccggacgcgcaaggttcgccgcagtgtggtcgccgaaaaatacgccgacatcatc
gatgcggtttatgccgggaacgacaaggttgatatcgacaccatgatcaccttccaggac
gggtcgaaaacccgcatccagacgagtgtgaaggttgtcgatctggacggggacaaggcc
gccgagacggcccccaaagccgccgaataa
DBGET
integrated database retrieval system
