Thalassospira xiamenensis: TH3_17935
Help
Entry
TH3_17935 CDS
T03639
Name
(GenBank) family 5 extracellular solute-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
txi
Thalassospira xiamenensis
Pathway
txi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
txi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TH3_17935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
txi02000
]
TH3_17935
Transporters [BR:
txi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
TH3_17935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AJD53689
UniProt:
A0AB72UHS5
LinkDB
All DBs
Position
3914062..3915966
Genome browser
AA seq
634 aa
AA seq
DB search
MGCFISLVLLLAVVLTAPRNNAYAAEFGEAPMLAEMVANGTLPPAAERLPKTPMIVTPTD
KLGQYGGTWMMAQNSERDHALLIRTIGYEPLLRWTPQWTDTVPNVALSMQANSDATEFVF
RLRPGMRWSDGAPFTAEDISFWYDDILRNPAFGNATPEWLTAGGNPVHVEKIDETTVAFR
FDTPYGLFPTFLARPEGVEPVSYPAHFLRPLLPKYNRHADADAQKLGFKDWKDRFLSVFG
MPGTIDDPSRWMNPQVPTLNGWILTGTYGKDDPLVAVRNPFYWKIDPGGRQLPYIDRVSF
DLVGSKDEAGDTAITGRVNMQERHIGRRVDEILAANNNLQSFTLIESDMNILTLSLNLND
RDPVLRDIFQNKEFRVALSHAIDRDSIIGRFVPGALPHQAAPRPESPLYHTVLARQFITY
DPVLAASHLANAGLTRKDDEGFLLRPDGKRLSFTIDTEGASRFEMLSAVIDYWRDVGLDV
TARDLSRDVFVDMREKNNHHASAWGGDGGLDAMVLPINYLPVSSESSWYATGWAQWYSDP
ENPDAVEPPAEVIRQLELYNQLKATADAEKQNKLMRDILDISANQFYVMGIALPPNRKGL
VAKNFKNVPKVIPAAWSYATPAPTNPSQYYLESQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
gtgggttgctttatatcgctggtattattgctggccgtggttttgaccgcgccccggaat
aatgcatatgcagccgaattcggcgaagcgccgatgcttgccgagatggtggcgaacggc
acattgcccccggccgcagaacgcctgcccaagaccccgatgattgttaccccgactgac
aagcttggccagtatggcggcacctggatgatggcgcaaaattcggaacgcgatcacgcc
cttctgatcaggacgatcggctatgaaccgcttctgcgctggaccccgcaatggacagac
acggttcccaacgttgctctttcgatgcaggccaacagtgacgccacggaatttgtcttc
cggttgcgtccgggcatgcgctggtcggatggtgcgccttttaccgccgaggatatatcc
ttctggtacgacgacattttacgcaatccggcttttggcaatgcgacgcctgaatggctg
accgcaggcggaaatccggtgcatgttgaaaaaatcgacgaaaccacggtcgcgttccgc
ttcgacacgccctatgggctgtttccgacctttcttgcccggcccgaaggtgtcgaaccg
gtaagctatcccgcccatttcctgaggcccctgcttccgaaatataacaggcacgcagat
gccgatgcgcaaaagcttggcttcaaggattggaaagatcgcttcctttcggtgttcgga
atgccgggcaccatagacgatcccagccgctggatgaacccgcaggttccgaccctgaac
ggctggattctgaccgggacatatggcaaagacgatccgctggttgcggttcgcaatccg
ttttattggaaaatcgatccgggcggacgtcagttaccctatattgatcgggtttccttt
gatctggtcggcagcaaagatgaagccggtgacaccgccatcacaggcagggtcaatatg
caggaacgccatattggccgccgcgtggacgaaattcttgcggccaataacaatctgcaa
tccttcacgctgattgaaagcgacatgaatatcctgaccctgtcgcttaatctgaacgac
agggacccggtgcttcgcgacatattccagaacaaggaattccgcgtggccctgtcgcat
gccatcgaccgcgacagcatcattggccggttcgttcccggtgccctgccccatcaggcc
gcaccacgtcccgaaagcccgctttaccacacggttctcgcacgccagttcattacctat
gatccggtacttgccgcaagccatctggcgaatgccggtttgacacgcaaagacgacgaa
ggtttccttctgcgtcccgatggcaaaaggctgtcctttaccatcgataccgaaggcgca
tcccgcttcgaaatgctctctgccgttatcgattactggcgtgatgtcggacttgatgtg
accgcccgcgacttatcgcgtgatgtatttgtcgatatgcgtgaaaaaaacaatcaccat
gccagcgcatggggcggtgatggcgggcttgatgccatggttctgccgatcaactacctg
ccagtatccagtgaatcatcttggtacgccaccggttgggcacaatggtattccgacccg
gaaaatcccgacgcggttgagcccccggccgaggttatccgtcaactggaactctataac
cagttgaaagccaccgcagatgcagaaaaacagaataaacttatgcgcgatattctcgac
atcagcgcaaatcagttttacgttatgggaattgccttgccgcccaatcgcaaagggctt
gtggcaaagaacttcaagaatgttcccaaggtcatcccggcggcttggagctatgccaca
ccggcaccaaccaatccatcccagtattatcttgagagccaataa
DBGET
integrated database retrieval system
