Thalassospira xiamenensis: TH3_19285
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Entry
TH3_19285 CDS
T03639
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
txi
Thalassospira xiamenensis
Pathway
txi00061
Fatty acid biosynthesis
txi00071
Fatty acid degradation
txi01100
Metabolic pathways
txi01212
Fatty acid metabolism
txi02024
Quorum sensing
txi04146
Peroxisome
Module
txi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
txi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TH3_19285
00071 Fatty acid degradation
TH3_19285
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TH3_19285
09145 Cellular community - prokaryotes
02024 Quorum sensing
TH3_19285
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
txi01004
]
TH3_19285
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
txi04147
]
TH3_19285
Enzymes [BR:
txi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TH3_19285
Lipid biosynthesis proteins [BR:
txi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TH3_19285
Exosome [BR:
txi04147
]
Exosomal proteins
Exosomal proteins of breast milk
TH3_19285
Exosomal proteins of breast cancer cells
TH3_19285
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Paralog
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AJD53959
UniProt:
A0AB72UIK8
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Position
4236346..4238037
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AA seq
563 aa
AA seq
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MNQINVQDAPVLQNGVDVSSPVRMRPVHEIFDDAAKRFAKRPCLDFLGRIYDYEDISRQI
DRVAEGFHQLGVRKGDKVGLCLPNTPYYVICYYAVLKCGGVVVNFNPLYAKREIAYQIED
SGCRLMVTLNLKQIYSKVADCLDVTCLKRIVICEMSDILPPVKSVLFSLFKRSELAEIPK
DLRHIPFSRLIDCKPINFVADVTNDDLAVLQYTGGTTGRPKGAMLTHGNLSANVDQLTRW
MPDANPGHEVTLCVLPFFHVFAMTVALNTSINLGAELVLQPRFELDALLKALDKKNVTIF
PGVPTIYTAINNSPETLKHDLSTIRCCISGGAPLPVEVKHRFEEITGAKVVEGYGLTEAS
PVCTCNPVKGVNKEGSIGIPMPGTEIQIRSLDRPDQIMPTGEKGEVCVRGPQVMPGYWQN
DAATKETFVDGWLKTGDVGYSDEDGYIFLVDRLKDVILCSGYNVYPRAIEEALYLHEQIA
EVTVIGVPDQYRGQAPKAFVRLKDDAAGVTAEDLRAFLDDKISRIEMPREIEIREELPKT
MVGKLSKKELVEEERLKREGKAQ
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaataaacgtccaagacgcgcctgtcctgcaaaacggtgtcgatgtcagctcg
ccggtgcgcatgcgcccggttcacgagatttttgatgatgccgcaaaacgttttgccaag
cgcccctgtcttgattttctgggtcgtatttacgactacgaagacatttccagacaaatt
gatcgcgtcgccgaaggctttcatcagcttggcgtgcgtaagggggacaaggtcgggctt
tgcctgcccaacacgccttattacgtgatctgctactatgccgtgctgaaatgcggcggt
gttgttgtcaatttcaacccgctttatgccaagcgcgagatcgcttaccagatcgaggat
tccggttgccgcctgatggtaacgcttaatctgaaacagatttattccaaggtggcagat
tgcctggatgtaacctgcctgaagcggatcgtcatctgcgagatgagcgacatcctgccc
ccggtcaaaagcgttcttttcagcctgttcaagcgcagcgaacttgccgaaatccccaaa
gatctgcgtcatatccctttctcccggctgatcgactgcaaacccataaatttcgtcgca
gacgtaacaaacgacgatttggccgtactgcaatataccggtggcaccaccggtcgcccg
aaaggcgcgatgctgacgcatggcaatctcagcgccaatgtcgatcaattgacgcgctgg
atgcccgatgcaaatccggggcacgaagttacgctttgcgttctgccgtttttccacgtc
tttgccatgaccgtggcgcttaacacgtcgatcaatcttggcgcagaacttgttttgcag
ccgcgcttcgaacttgatgccttgctaaaggcactggataaaaaaaacgtcacgatcttc
ccgggcgtgcccacgatctataccgcgatcaacaactcgcccgagacattgaagcatgac
ctgtcaacgatccgatgctgcatttccggcggcgcgcccctgccggtcgaagtcaaacac
cggttcgaggaaattacgggcgcaaaagtggtcgagggatacggcctgacagaggcaagc
cccgtctgcacatgcaatccggtaaaaggtgtcaacaaggaaggatcaatcggtatcccg
atgccgggtaccgaaatccagatcaggtcgcttgaccgaccggatcagatcatgccgacc
ggcgagaaaggcgaggtttgcgtccgcggcccgcaggtaatgcccggctactggcagaac
gatgccgcaaccaaagaaacctttgtcgatggctggctgaaaaccggtgatgtcggttat
tccgatgaggacggatatatctttctggttgatcggcttaaagacgtcatcctgtgcagc
ggttataatgtctatccgcgcgccatcgaggaagcgctttatctgcacgaacagatcgcc
gaagtcaccgtgatcggcgtgcccgatcaatatcgcggtcaggcaccaaaggcctttgtc
cggctgaaagacgacgccgcaggcgtgaccgccgaagatttacgggctttccttgatgat
aaaatctcgagaatcgagatgccgcgcgaaatcgaaatacgcgaagagcttcccaagacc
atggtcggcaaattgtcgaagaaggaactggtcgaagaagaacgcctgaaacgcgaggga
aaagcacaataa
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