Thalassospira xiamenensis: TH3_19940
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Entry
TH3_19940 CDS
T03639
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
txi
Thalassospira xiamenensis
Pathway
txi03030
DNA replication
txi03430
Mismatch repair
txi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
txi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TH3_19940 (holA)
03430 Mismatch repair
TH3_19940 (holA)
03440 Homologous recombination
TH3_19940 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
txi03032
]
TH3_19940 (holA)
03400 DNA repair and recombination proteins [BR:
txi03400
]
TH3_19940 (holA)
Enzymes [BR:
txi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TH3_19940 (holA)
DNA replication proteins [BR:
txi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TH3_19940 (holA)
DNA repair and recombination proteins [BR:
txi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TH3_19940 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AJD54090
UniProt:
A0AB72UIW8
LinkDB
All DBs
Position
4383507..4384538
Genome browser
AA seq
343 aa
AA seq
DB search
MKLKAAQVENFLRAPDAKAQLVLIYGEDEGLVRERAVRLAKTVVEDLKDPFRVIELGTAQ
LKEDASRLRDEAAAISFGGGRRVIRIRDIGEAQAPIITDFLADPAGDALIIIEAGSLASK
SKLRQTVEKAGNGMALPCYADSGRDIEALINSVMEDHKLRIDRDAIRYLVGNLGSDRMIS
RSELEKLALYALKEGQVTLADAMACVGDSSARHYDDVVQAVSQGNVASLDSALTRLVEEG
LNPVGALRMMIGYFQKLHLVKGQMAQGTNAEQAMKSLRPPLFFKAADQFRANLQNWALGN
LQRALQILLEAEKDCKSGLAIPETIAHRAMIKVAVARQKQGRR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaggcggcacaggtcgaaaatttccttcgcgctcccgatgccaaggcgcaa
ctcgtcctgatctatggcgaggatgaggggcttgtacgagaacgtgcggtcagacttgcc
aagaccgtggtcgaggatctcaaggacccattccgcgtaatcgaacttggcactgcccag
cttaaggaagacgccagccgtctgcgcgatgaagccgccgccatcagttttggtggcggg
cgccgtgtgatccgaatccgcgacattggcgaggcacaggcccccatcattaccgatttc
cttgccgatcccgccggtgatgccctgatcatcatcgaagccggcagccttgcgtccaaa
tcgaaactgcgtcagacggtcgagaaagccggtaatggcatggcgctgccctgctatgcc
gatagcggacgggatatcgaagccctgatcaattccgtcatggaagatcacaaactgcgc
attgatcgcgatgccatacgctatctggtcggtaatctcggctctgacaggatgatttca
cgaagcgaacttgaaaaactggctctttacgctctgaaagaaggtcaggtcacattggcc
gacgcgatggcctgtgtcggggatagttccgcccgccattatgacgatgtcgtgcaagcc
gtatcccagggcaatgtcgcaagcctcgatagcgccctgacccgcctggtcgaagaaggc
ctcaatccggttggcgcacttcgcatgatgatcggctattttcaaaaactgcatctggtc
aaaggccagatggcacaaggcacgaatgccgaacaggcgatgaaatcgttgcgtcccccc
ctgtttttcaaggccgcagatcagtttcgcgccaatctgcagaattgggcattgggaaat
ctgcaacgcgccctgcaaatcctgctagaagccgaaaaggattgtaaaagtgggcttgcc
atccccgaaaccatcgcacaccgcgcgatgatcaaggtcgccgttgcccgccagaagcag
ggcagacgctaa
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