Thalassospira xiamenensis: TH3_20030
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Entry
TH3_20030 CDS
T03639
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
txi
Thalassospira xiamenensis
Pathway
txi03030
DNA replication
txi03430
Mismatch repair
txi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
txi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TH3_20030
03430 Mismatch repair
TH3_20030
03440 Homologous recombination
TH3_20030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
txi03032
]
TH3_20030
03400 DNA repair and recombination proteins [BR:
txi03400
]
TH3_20030
Enzymes [BR:
txi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TH3_20030
DNA replication proteins [BR:
txi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TH3_20030
DNA repair and recombination proteins [BR:
txi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TH3_20030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AJD54108
UniProt:
A0AB72UIN1
LinkDB
All DBs
Position
complement(4403595..4404308)
Genome browser
AA seq
237 aa
AA seq
DB search
MREIVLDTETTGLDPYADHRLVEIGCIELINHMPTGQQYHQYINPQRPMPKEAFDVHGLG
DDFLKDQPVFAEIVDDFLKFIGDDSLLVIHNAAFDMKFLNAELEWLSKPKIDMNRAIDTV
QMARKKFPGSPVSLDALCRRFKIDNSNRTLHGALLDSDLLALVYLELLGGRQHGLLLDSN
AKDKAKETANTPRMVVGPKENRLEPRLHIVSDEELAAHRAYIETKVSGAFWLKHEEV
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaattgtccttgatacggaaaccaccggccttgatccatatgcagaccatcgt
ctggtggaaatcggttgcatcgagttgatcaatcacatgccgacgggacagcaatatcac
caatatatcaatccgcagcgtccgatgccaaaagaggcatttgacgttcacggtctcggt
gacgatttccttaaagaccagcctgtttttgccgaaattgtcgatgattttctcaaattt
atcggcgatgattcgcttcttgtgatccataacgctgcgttcgatatgaaattcctgaac
gcagaacttgaatggctgagcaagccgaaaattgacatgaatcgcgcgattgacaccgtg
cagatggcgcgcaaaaaattccctggttctccggtcagcctcgatgcgctgtgtcgtcgt
ttcaagatcgataactcgaaccgtaccctgcacggcgcactgctcgattccgatctgttg
gcgctggtttatcttgaactgctgggggggcggcaacatgggcttttgcttgattccaat
gccaaggacaaagcaaaggagaccgcgaataccccgcgcatggtggtggggccaaaggaa
aatcgtcttgaaccacggctccatatcgtcagcgacgaagaactggctgcacatcgcgcc
tatattgaaacaaaggtttccggtgccttttggctaaagcacgaagaggtatga
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