Thalassospira xiamenensis: TH3_20490
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Entry
TH3_20490 CDS
T03639
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
txi
Thalassospira xiamenensis
Brite
KEGG Orthology (KO) [BR:
txi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
txi03016
]
TH3_20490 (truB)
Enzymes [BR:
txi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TH3_20490 (truB)
Transfer RNA biogenesis [BR:
txi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TH3_20490 (truB)
Prokaryotic type
TH3_20490 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AJD54200
UniProt:
A0AB72UJB0
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All DBs
Position
4490124..4491050
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AA seq
308 aa
AA seq
DB search
MARRRRGRSINGWLAVDKPLEITSSTVVNQVRRLLDAAKAGHGGTLDPLASGVLPIAFGE
ATKTVAYVMDGSKSYRVTLKFGEARSTDDAEGEVTATSDHRPDADEIKAVLGEFIGEIQQ
VPPKFSAIKVNGKRAYDLARRDEDVVLKPRPILIKDLRLVDMPDRDHAVLEVVSGKGAYM
RSLARDIALRLGSVGHISALRRTSAGPFPETSSIPLAELLEMDPDAVLEKLLPVETALDD
IPALALTEVEAQRLSSGQPVGLLPVAKRSALETPVVQDDIVCAMLHDRAVALAEISGGEI
RPVRVFNL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcggcgtcgcggtagaagcatcaatggctggctggcagtcgacaagcccttg
gaaatcacctcttcgacggtggtcaatcaggtgcgtcgtctgcttgatgcggcaaaggcc
ggtcacggcgggacacttgacccattggcgagtggtgtcctgcctattgcatttggcgag
gcgacaaaaacggttgcctatgtcatggatggcagcaaaagttatcgtgtgacgcttaaa
ttcggcgaagcacgcagcaccgacgatgccgagggcgaggttacggccacctcggatcat
cgtccggatgcagacgaaataaaggccgtgctgggtgagtttattggcgaaatccagcag
gtgccgccaaagttttcggcgatcaaggttaatggcaagcgtgcctatgatcttgcccgt
cgcgatgaagacgtggtgcttaaaccgcgtccgattctgatcaaggatcttcgactggtc
gatatgccggatcgcgatcatgccgttctcgaagttgtttcgggcaaaggggcatatatg
cggtctttggcgcgcgatattgcgctgcgcctgggttctgtcggccatatatccgccctt
cgccgcacgtcggcggggccgtttcctgaaacgagttccattccgcttgcggagttgctt
gaaatggatccggatgcggtgttggagaaattgcttccggtcgagaccgcgctggacgac
atcccggcgctggccctgaccgaagtcgaggcgcagcggctatcgagtgggcaacctgtc
gggttgttgccggtggcaaaacgcagtgccctcgaaacccccgtcgtgcaggacgatatc
gtctgcgccatgctccatgaccgcgcggttgcgttggcggagataagtggcggcgaaatc
cggcctgtacgtgtttttaatctctaa
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