Thermoanaerobacterium xylanolyticum: Thexy_0522
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Entry
Thexy_0522 CDS
T01505
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
txy
Thermoanaerobacterium xylanolyticum
Pathway
txy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
txy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Thexy_0522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
txy03400
]
Thexy_0522
DNA repair and recombination proteins [BR:
txy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Thexy_0522
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Thexy_0522
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF7934
Kinesin
Microtub_bd
DUF87
JHD
DUF8810
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEF16573
UniProt:
F6BHJ2
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All DBs
Position
541966..543951
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AA seq
661 aa
AA seq
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MSEFKLVSDYKPTGDQPEAIRKLTEGVNIGLKCQTLLGVTGSGKTYTMANIIKNVNKPTL
VIAHNKTLAAQLCAEFKEFFPENAVEYFVSYYDYYQPEAYVPQTDTYIEKDASINEEIDK
LRHSATAALFERRDVIIVASVSCIYGLGDPEDYEELMLSLRPGMIKDRDEILKKLVDIQY
ERNDINFVRGKFRVRGDVIEVFPASSSDKAIRIELFGDEIDRITEIDVLTGEIIGERSHV
AIFPASHYATSKEKLKKAIESIEKELEERYKELKDQGKILEAERLKQRTNYDIEMLQEVG
YCSGIENYSRHISGRAAGSPPYTLLDYFPDDFLMFIDESHVTIPQIRGMYNGDRARKESL
VDFGFRLPSAFDNRPLKFEEFEERINQLICVSATPGPYELEHSERVVEQIIRPTGLLDPE
VVVKPVKGQVDDLLSEIKMTVEKGYRVLVTTLTKKMAEDLTDYFRDMGVKVKYLHSDIET
IERMEIIRDLRLGKFDVLIGINLLREGLDLPEVALVAILDADKEGFLRSETSLIQTIGRA
ARNADGKVIMYADIVTESMKNAINETNRRRAIQMEYNKKHGITPKTIVKGIRDVIEATKV
AEDKGTYKVKKAEVIDKVSIEKMISELEKEMKKAAKDLEFEKAAKLRDRIFELQKMMKNA
I
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagttcaaacttgtatcagattataagcctacaggtgatcagccggaagcaata
agaaaattgacagaaggcgtaaacataggccttaagtgtcagacattgttgggggtcacc
ggttctggcaaaacatacactatggcaaatatcataaagaatgtcaataaacctacactt
gtaattgcacataataagactttagcagctcagctttgcgcagagtttaaagaattcttt
ccagagaacgctgtagaatactttgtaagttactatgactactatcaaccagaggcttat
gttccacagacagatacttatattgaaaaagatgcatccataaacgaagaaattgataaa
cttaggcattcagctactgcagcccttttcgagcgaagagacgtgattatcgttgccagt
gtttcatgcatatacggattaggtgatccggaggattatgaggagcttatgctttcttta
aggcctggcatgataaaagatagagatgagattttgaagaaacttgttgacattcaatac
gaacggaatgacataaattttgtaagaggcaagtttagagtgagaggtgatgtaatagag
gttttcccagcatcatcatctgacaaagcaatcaggatcgagctttttggcgatgagatc
gatagaatcacagaaatagatgtattgactggcgagataatcggtgaaagaagccatgtg
gctatctttccagcatcacactatgctacatcgaaggaaaagttgaaaaaagccatagaa
agcatagaaaaagagctggaagaaaggtataaagagcttaaagatcaagggaaaatttta
gaagctgaaaggcttaaacagaggactaattacgatatcgagatgcttcaagaagtcggg
tattgttctggaattgagaattattcgaggcatatatcaggcagggccgctggaagcccg
ccgtataccctgttagattactttcctgatgattttttaatgttcatcgatgaatcacat
gtcacaataccgcagattagaggcatgtacaatggagatagagccagaaaagaatctttg
gtggattttggttttaggcttccgtctgcatttgacaatagacctttgaaatttgaggaa
tttgaagagaggataaatcagctaatatgtgtttctgctacacccggtccatatgaattg
gagcattctgaaagagttgttgagcagataataagaccaacagggcttttagacccagaa
gtggttgttaaacctgttaaaggacaagtagatgatctactaagcgagataaaaatgact
gtggaaaaaggatacagagtattagtcacgactttgacaaaaaagatggccgaagattta
acagattattttagggacatgggtgtgaaagtgaaatatctgcattcggatattgaaacg
atagagagaatggagataattagggatttgaggttaggtaagtttgatgtcttaattgga
ataaatctgttgagagaaggtttggatttgcctgaagtggctttagttgctattctcgat
gcagataaagagggctttttgcgttcggaaacttcacttatacagactataggccgtgct
gcgagaaatgccgatggaaaagtcatcatgtatgcagacattgtaacagaatctatgaaa
aacgccataaacgaaaccaacagaagaagagccatacagatggaatacaacaaaaagcac
ggtattacgccaaagacgattgtaaaaggcataagagatgtgatagaggctacaaaagta
gcagaagataagggcacttataaggtgaagaaagcagaagtaatagacaaagtatctatt
gagaaaatgataagtgaacttgaaaaagagatgaaaaaagctgcaaaagaccttgaattt
gaaaaagctgcaaaactcagagataggatatttgaacttcaaaagatgatgaaaaatgct
atatga
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