Thermoanaerobacterium xylanolyticum: Thexy_0580
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Entry
Thexy_0580 CDS
T01505
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
txy
Thermoanaerobacterium xylanolyticum
Pathway
txy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
txy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Thexy_0580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
txy03400
]
Thexy_0580
DNA repair and recombination proteins [BR:
txy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Thexy_0580
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Ortholog
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GFIT
Motif
Pfam:
Ku
Prok-RING_4
AAA-ATPase_like
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
AEF16631
UniProt:
F6BHW2
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All DBs
Position
complement(608015..608824)
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AA seq
269 aa
AA seq
DB search
MRSMWKGAISFGLVSIPIKLYAATEDNSIHFRQLHKDCKSPIKYEKICPVCNKEVSDEEI
VKGYEYEPGKFVIIDEEDLERIPKSTVKTIDIIDFTDLRQIDPIYFDKTYYIAPDEIGAK
PYVLLRDSMKKLNRVAVARVVIRSKQDLACIRVFNDNYMVMETMHFPDEIRSTNELPPIR
NVDLHENEVKMAIKLVDTLTSDFSPEKYDDNYRKALIEIIESKIQDRKIEIPESPKEENV
LDLVSALKASIESVKGENIAKKSKKKKGA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgatgtggaagggtgccatcagctttggccttgtcagcatccccataaaactt
tatgcagccacagaagacaactccatccattttagacagcttcacaaggactgcaaatca
cctataaaatacgagaagatttgccctgtgtgcaataaagaagtttctgatgaagaaatc
gtaaaaggctatgaatatgaaccaggaaaatttgtcatcatagatgaagaagacttagag
agaattccaaagtcaacagttaaaacgatagatattatcgattttacagatttaaggcaa
atagatcccatatatttcgataagacatactacatcgcaccagatgaaataggtgcaaaa
ccatacgtacttctaagagattctatgaagaaattaaaccgtgtagcagtcgcgcgggta
gtaatccgctcaaagcaagatttagcctgcataagagttttcaatgacaactacatggtt
atggaaacaatgcactttcctgatgaaataagaagtacaaatgagcttccacctatccgc
aatgtagatcttcacgaaaatgaggtgaaaatggctataaaacttgtggatactctgaca
tctgatttttcccctgaaaaatatgatgacaactacagaaaagccctgatcgaaataatc
gagtcaaaaattcaagatagaaaaattgaaatacctgaatcgccaaaagaagaaaatgtc
ctggaccttgtaagcgcattaaaagccagcatcgaatcagtaaaaggagaaaacattgca
aaaaaatcaaaaaagaaaaaaggtgcataa
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