Thermoanaerobacterium xylanolyticum: Thexy_0632
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Entry
Thexy_0632 CDS
T01505
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
txy
Thermoanaerobacterium xylanolyticum
Pathway
txy03030
DNA replication
txy03430
Mismatch repair
txy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
txy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Thexy_0632
03430 Mismatch repair
Thexy_0632
03440 Homologous recombination
Thexy_0632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
txy03032
]
Thexy_0632
03400 DNA repair and recombination proteins [BR:
txy03400
]
Thexy_0632
Enzymes [BR:
txy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Thexy_0632
DNA replication proteins [BR:
txy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Thexy_0632
DNA repair and recombination proteins [BR:
txy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Thexy_0632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF6282
Motif
Other DBs
NCBI-ProteinID:
AEF16683
UniProt:
F6BI75
LinkDB
All DBs
Position
672437..675871
Genome browser
AA seq
1144 aa
AA seq
DB search
MFVHLHVHSEYSLLDGSCRIKELIKRTKELGMNSIAITDHGVMYGAIDFYKEAVSYGVKP
IIGCEIYVSPRSLYDKEYGIDNLNYHLILLCKNMTGYENLMKIVSKASIDGFYYKPRIDH
QYLKEHSEGLIALSSCLGGEIPSYLISDDYEKAKETAIFYNSIFGTGNFYLELQYHGLSQ
QEKVNSELIKLSQELNIPLVATNDVHYLKKEDHLAHEVLLCIQTGKNMDDSDRMSFPTDQ
FYLKSPDEMYEMFSYCKEALENTVKIADMCNLEFEFNKTKLPKFEVPDGMKSDEYLRKLC
IDGLYKRYPNPTDEVMERLNYELSVIEKMGYVDYFLIVWDFIKFARDNGIMTGPGRGSAA
GSLVAYCLGITKIDPIKYNLLFERFLNPERVSMPDIDSDFCYERRQEVIDYVVKKYGEDR
VAQIITFGTMAARAAIRDVGRALNFPYAEVDVIAKMIPFELGMTIDKAIELNPELKDKYE
KDEKIRRLIDISRSLEGLPRHASTHAAGVVISSEPLVKYVPLQKNEGSIVTQFTMTTLEE
LGLLKMDFLGLRTLTVIRDTLDIVKETRGIDVDIDSIDFEDKEVYALISRGDTEGVFQLE
SSGMKQFMTELRPEKLEDVIAGISLYRPGPMDQIPRYIENKNNPENIKYEHPLLKPILDV
TYGCMVYQEQVMQIVRDLAGYSLGRSDLVRRAMAKKKMKVMEEERKNFIYGIKDENGNYV
VPGAVNRGVDEATANRLFDEMIDFANYAFNKSHAAAYAVVAFQTAYLKRYYPVEFMAALL
NSFVDNTDKVAFYVQVLKKIGIQILPPDINESYSYFTVVNGKIRFGLAAVKNVGLNATLE
IVEDRKKNGRYTSIIDFFERIDEMQLNKKAVESLIKAGAFDSFGVYRSQLLAVYEGIMES
IHRSREKNIKGQMSLFESDSESHKIDYSLPDIKEFSKGVILSMEKETMGLYISGHPLDEY
QDDIRRIANCTTRDLKNSDDSFVKKSAFDDQDVVLVGIVESKKIKFTKNNNMMAFVNLAD
LYGTIEVIVFPAVYERYSKFLSEDLPVIIKGKVSLREDEEPKILCDEVEPLTHRIREKLW
LNVKEQKDVEKIKGILTKYKGNIPVFIRYENKNLAAQKDLWVNGANELLDELASVLGKEN
VKIV
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtacatttgcacgttcacagcgaatacagtcttcttgatggttcatgcagaata
aaagagcttataaagaggacaaaagagcttggaatgaactctatagctattacagatcat
ggcgtcatgtacggtgccattgacttttacaaagaagccgtatcttatggtgtaaaacct
ataattggatgtgagatttacgtctctccaagatcactatacgataaagaatacggcata
gataatctaaactaccatttaattttactatgtaaaaacatgactggatatgaaaatttg
atgaaaattgtctcaaaggcatctattgatggtttttactataaaccgaggattgatcat
cagtacttaaaagaacacagtgaaggtctgatagcgcttagctcatgtcttggcggtgaa
ataccatcatatctcatatctgatgattatgaaaaagctaaagagactgctattttttat
aactctatttttggaacaggtaacttttatttggagcttcaataccacggtttaagccaa
caagaaaaagtaaattcagaattgataaagctttcacaagagctaaacatacctcttgtg
gctacaaatgatgttcactaccttaaaaaagaggatcatttggcacatgaagtccttttg
tgcatccagacaggtaaaaatatggatgattctgacaggatgtcatttccaacagatcag
ttttatttaaaatcacctgatgagatgtatgagatgttttcttattgcaaggaagctttg
gagaatacggtaaaaattgctgatatgtgcaatctggaatttgaatttaataaaacgaag
cttcctaagtttgaagtgccagacggcatgaagtctgatgaatatttgagaaagttatgt
attgatgggttatataaaaggtatccaaatccaactgatgaagtgatggaaaggctaaac
tacgagctttctgtgatagaaaagatgggatatgttgattactttttaatcgtttgggat
tttattaaatttgcccgcgacaatggaataatgactggtcctggaaggggttcggctgca
ggaagtcttgtggcatactgcctcggcataacaaagattgatcctataaagtacaatctt
ctttttgaaagatttttgaatcctgaaagagtaagcatgccagatatagactctgacttt
tgctatgagagaagacaagaagtaattgattatgtagtcaaaaagtatggagaagacaga
gtggctcagataataacatttggtacaatggctgccagggctgccataagagatgtgggg
cgtgccttaaacttcccttacgctgaagttgatgtcattgcaaaaatgatacctttcgaa
ctgggtatgactatagataaagcaatcgagttaaatccagagctaaaagataagtacgaa
aaagacgagaagattaggcgattaattgatatttcaagatctcttgaaggtcttccgagg
catgcttctacacacgctgctggcgtagttatatccagtgaaccactggttaaatacgtg
ccacttcaaaaaaatgaaggctctattgtcacacagtttacaatgacgactttggaagaa
ttaggtcttttaaagatggattttttaggtttaaggacacttactgtcataagagatact
ttggatatcgtaaaagagaccagaggaatagatgttgacatagacagtattgactttgaa
gataaagaagtttatgcactgataagcagaggtgatactgagggcgtatttcaattagag
tcatctggaatgaaacagtttatgacagagctaaggccagaaaagttggaagatgtaata
gcgggtatatcgctttatagaccgggaccgatggatcaaataccaagatacatagaaaat
aaaaataaccctgagaatataaagtatgaacatccacttcttaaaccaattcttgatgtc
acatacggttgcatggtgtatcaggaacaagttatgcaaatagtaagggatctggcaggg
tattcattgggaaggtctgacttggttcgccgtgctatggcgaagaaaaaaatgaaggtc
atggaggaagagagaaaaaacttcatttatggaattaaggatgaaaatgggaattacgtt
gtaccgggagctgtaaatagaggcgtcgatgaagctacagctaacaggctttttgacgaa
atgatagattttgccaattatgcattcaataaatctcatgctgcagcttatgctgttgtg
gcatttcaaacagcatatttaaagcggtattatcctgttgaattcatggctgcattgctt
aatagctttgttgataatacggacaaggtggctttttatgtacaagttctaaaaaagatt
ggtatacagattttgccgccagacataaatgaaagctattcctactttaccgtcgtcaat
ggcaaaatcagatttggccttgctgctgttaagaatgttgggttaaacgccactctggaa
attgtagaagacagaaagaaaaatggcaggtacacttctatcatagacttttttgagaga
atagacgaaatgcaattaaacaagaaggccgttgaaagtctcataaaagctggtgcattc
gattcatttggtgtctacagatctcaattattggctgtttacgaaggcatcatggaaagc
attcatagaagcagagagaaaaatataaagggacagatgtctttatttgaaagtgattca
gaaagccataaaatcgactattcgcttccagatatcaaagaattttctaaaggcgtaata
ctttctatggaaaaagagactatggggctttatattagcggtcatccacttgacgaatat
caagacgacatacgaagaatagcaaattgtacaaccagagacttgaaaaatagcgatgat
tcgtttgtaaaaaaatctgcctttgatgatcaggatgttgttttggtagggattgtagag
agcaaaaaaataaagtttacaaaaaataacaatatgatggcttttgtaaatcttgcagat
ttgtatggtaccatcgaagtcatcgtatttcctgctgtgtacgaaaggtattcaaaattt
ttaagtgaagatctccctgttataataaagggcaaagtcagtttaagagaagatgaagag
ccaaagattttatgcgatgaagtcgaaccacttacacacaggataagggaaaaactgtgg
cttaatgtaaaagaacaaaaagatgtggaaaagattaagggcatcttaacaaaatacaag
ggaaacattccggtttttataagatatgaaaataaaaatctggcagcacaaaaagatctt
tgggtaaatggtgcaaatgagcttttggatgaacttgcaagtgtactgggaaaagaaaat
gttaaaattgtataa
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