Thermoanaerobacterium xylanolyticum: Thexy_1261
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Entry
Thexy_1261 CDS
T01505
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
txy
Thermoanaerobacterium xylanolyticum
Brite
KEGG Orthology (KO) [BR:
txy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
txy03400
]
Thexy_1261
DNA repair and recombination proteins [BR:
txy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Thexy_1261
Archaeal homologous recombinant proteins
Thexy_1261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SbcC_Walker_B
AAA_29
AAA_21
AAA_27
SMC_N
ABC_tran
DUF3090
Mut7-C
Motif
Other DBs
NCBI-ProteinID:
AEF17294
UniProt:
F6BLP7
LinkDB
All DBs
Position
complement(1322449..1325010)
Genome browser
AA seq
853 aa
AA seq
DB search
MVPIRLTLKNFMSYSENEVMDFTRFHIAAITGKNGNGKSSLWDAITWCIWGRARGLDGAG
RGSDDLIRIGADEMEVEFIFKINNTKYRILRKKKRNSSSILEFHIIGDDGTLKSLTQERL
EDTRDKIESTIMLDYDTFVASSFMPQNKYGFFSEADSTKRKEIFSEVLGLDIYDRLQEKA
KIKRNEYEKKVNIIDEQLKLYMNEVKDKNELVYKRDELLKKCSEKKCEIDRLSIDLNELD
EKKRYMDDNIIKYNEYSERIKFNEKVISEYKIMMEDMKNKINEVNNLLKDESEILEGYNT
FKFVKEQLKELEKKYTDFNQLEREKIQIETNINILRKETQLELKNLQFKYNDTLLRYNEI
ENNVSKLRELEKGLQEIDNLQEKIKLNDEEIQKSTQKIAEYKVQLDNFNKKTEELKENYK
AILQTGAKCPLCNSPLDENKKSGLLNDIKKEINDISNKIYAIKDEILKEQNNIRFLKKER
ENLLMLQNKREKLIANIDSLKNAIAEKESLLNLLNELKKKIDDVNNYLANESFASAEKDK
LSDVETKLKNLNFSIELYENIKNKYELYRDFEKKYERLCISKKNLSDYQNTYQSYKKTIE
VYSEYLNKDKEMLEFFKSQLVGYDNLLDDIKKIKQKMDIVNNEYLELNASLTSIVDQLNR
LEILEKKIVDLNKERDVYLSEIHYYEILEKSFSKKGIQALIIENALPEFEDTANNFLSKL
SDGKMYVSLVTQKINKNGSVQETLDIEISDELGKRKYELFSGGEAFRINFALRIALSKFL
SRRAGVNLQTLIIDEGFGSQDVLGRQNIIDVLNMIKDEFELVLVITHIDELKESFPYSIE
ITKDENGSHIVYP
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggttccaataaggcttacgttgaagaattttatgtcatattctgaaaacgaagtaatg
gattttacaagatttcatattgctgcaattacaggtaaaaatgggaatggtaaatcatca
ctttgggatgctataacatggtgtatttggggaagagctagaggtttagatggtgctggt
agaggcagtgatgatcttataagaattggtgctgatgagatggaagtagaattcatattc
aaaataaataatactaaatatcgaattctaagaaagaaaaaaagaaattcaagttccatc
cttgaatttcatataataggagatgatggaacattaaaatcattgactcaagaaagatta
gaagatacaagagacaaaattgaaagcactatcatgttagattatgatacttttgttgct
tcatctttcatgccacaaaacaagtatggctttttttctgaggctgattcgacaaaaaga
aaggagatattttctgaggtcctgggcttagatatatacgatagattgcaggagaaagct
aaaataaagcgcaatgaatacgagaaaaaggtaaatattatagatgaacaattgaaactg
tatatgaatgaagtaaaagataaaaatgagttagtttacaaaagagatgaacttttaaaa
aaatgcagtgaaaaaaaatgcgaaattgacaggttgagcattgatttaaacgaattagat
gaaaaaaaacgctacatggatgataacataataaaatacaatgaatatagtgaaagaata
aagtttaacgaaaaagtaatctcagaatacaagattatgatggaggatatgaaaaataaa
ataaatgaagtaaataatcttttgaaggatgaaagtgaaatccttgaaggatataataca
tttaaatttgtaaaagaacagctaaaagagcttgaaaaaaaatatactgattttaatcag
cttgaaagagaaaaaatccaaattgaaactaacataaatatattgagaaaagaaactcag
ttggaactaaagaatttacaatttaaatacaatgatactttactaaggtacaatgaaata
gaaaataatgtttcaaaattacgtgaattggaaaaaggcctacaggaaattgataattta
caagaaaaaataaaattaaacgatgaagaaattcaaaaatctactcaaaaaatagctgaa
tataaagttcaactggacaattttaataaaaagacggaagaacttaaagaaaactacaaa
gcaatattgcaaactggtgcaaaatgtccattgtgtaattcaccgcttgatgaaaataaa
aaaagcggtttgctgaatgatatcaaaaaagaaataaatgatatatcaaataagatatat
gcaataaaagatgaaattttaaaagagcaaaacaatataagatttttaaaaaaagaacga
gaaaatctgttgatgcttcaaaataaacgggaaaagttaatagctaacatagattcactt
aaaaatgctattgctgaaaaagaaagcttattaaatctactaaacgaattaaagaaaaaa
attgacgatgttaataattatttggcaaatgaatcttttgcttctgctgaaaaagataaa
ttgtcagatgttgaaactaaattaaaaaatttaaacttttcaattgagctttatgaaaat
ataaagaataaatatgaattatatagagactttgaaaaaaaatatgaaagactttgtatt
tcaaaaaaaaatctatctgattatcagaatacatatcaaagttataaaaagacaatagaa
gtttattcagaatatctaaacaaagacaaagaaatgttggagtttttcaaatcacagctt
gttggttatgataatttgttagatgacataaaaaaaataaaacaaaaaatggatattgtt
aacaatgaatatctggaactaaatgccagtttaacatctattgttgaccaactgaatagg
ttagaaattttagagaaaaaaattgtcgatttaaataaagaaagggatgtttatctatcc
gaaatacattattacgaaatattggagaaaagttttagcaaaaagggtatacaagcgtta
attatagaaaatgcattgccggaatttgaagatactgccaacaattttttatctaaatta
tcagatggaaagatgtatgtaagtctagtaactcaaaaaattaacaaaaatggctctgta
caagaaacgcttgatatagaaatttcggatgagttgggaaaaagaaaatacgagcttttt
agcggtggagaagcctttaggatcaattttgcgttgagaatcgccttgtcaaaattttta
tcaagaagagcaggtgttaatttacaaaccttaataatagacgaaggctttgggtctcaa
gatgtccttggacgtcaaaatattattgacgtattgaatatgataaaagatgaatttgaa
ttagtcttagtaataacgcatattgatgaacttaaagaaagttttccatactcaatagag
attacgaaagatgaaaatggttcacatatagtttatccttaa
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