Thermoanaerobacterium xylanolyticum: Thexy_1280
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Entry
Thexy_1280 CDS
T01505
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
txy
Thermoanaerobacterium xylanolyticum
Pathway
txy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
txy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Thexy_1280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
txy03019
]
Thexy_1280
03016 Transfer RNA biogenesis [BR:
txy03016
]
Thexy_1280
Enzymes [BR:
txy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Thexy_1280
Messenger RNA biogenesis [BR:
txy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Thexy_1280
Transfer RNA biogenesis [BR:
txy03016
]
Prokaryotic type
tRNA degradation factors
Thexy_1280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
SNF5
EXOSC1
DUF1773
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AEF17313
UniProt:
F6BFH4
LinkDB
All DBs
Position
complement(1343832..1345934)
Genome browser
AA seq
700 aa
AA seq
DB search
MEKIFELDLAGRKLIVQTGKLAQLANGSALVRYGDTVVLVTACASKEPREGVDFFPLSVD
YEERLYSVGKIPGGFIKREGKPTEKAILTSRLIDRPIRPLFPHGYRNDVQVIATVLSVDP
DVQPEIVAMIGSSVALSISDIPFNGPTGSVSVALVDGNFIINPDLEAREKSDLHLTVSGT
KDAIMMVEAGANEVPEEVMLDAIMYAHEYIKQIVEFIEGIVKEVGLPKAEVIVHEIDDNL
EQQVREFATEKIYNALRTEEKKERNDNIDKVEEEVLEHFKDEYPDNLEDIDEVLYTITKE
QMRKMITEEKIRVDGRGLDDIRPITCDVGVLPRTHGSAIFTRGQTQVMTVATLGPLGDIQ
ILDGLGDEESKRYMHHYNFPPFSVGETRPLRGPGRREIGHGALAERALEPMIPSEEEFPY
TIRLVSEVLSSNGSTSQASVCGSTLALMDAGVPIKAPVAGVAMGLIKEGDIVSILTDIQG
IEDFLGDMDFKVAGTEKGITAIQMDIKIAGIDRDILSLALEKARKGRLFILNKMLETIKE
PRKELSPYAPRIISLNVDPEKIRDIIGAGGKTINKIIADTGVKIDIEDDGRVFISSTDLK
AGEKAKMIIEAITKDVEVGSIYLGKVTRLASFGAFVEIAPGKEGLVHISKLDKKHVNKVE
DVVNIGDEILVKVTEIDKQGRINLSRKDALPEETKNDKEV
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagatttttgaacttgaccttgcagggagaaaattaatcgttcaaactggaaaa
cttgcacaattggctaatggtagtgctcttgttagatatggtgatacagttgtgctggtt
acggcttgcgcttctaaagaaccaagagaaggagttgactttttccctttaagtgttgat
tatgaagaaagactttattccgttggtaaaatacctggtggttttattaaaagggaaggt
aaacctactgagaaagcaatattgacatccagattaatagataggccaataaggccacta
tttccacatggctatagaaatgatgtgcaagttattgctactgttttatctgtagaccct
gatgttcagccagagatagtggcaatgataggttcttcagttgctttatctatatctgat
attccttttaacggacctacaggttctgtatcagtagcacttgtagatgggaatttcata
ataaatcctgacttagaagcgagagaaaaaagtgatttgcacttgactgtctcaggtaca
aaggatgctataatgatggttgaggctggtgccaatgaggttccagaggaagtaatgtta
gatgcaataatgtacgctcatgaatacataaaacagatagtagaatttatagaaggcatt
gtaaaagaagtaggacttccaaaagcggaagtaatagtgcatgaaatagatgacaactta
gaacaacaagttagggaatttgcaactgaaaaaatatataatgctttaagaacagaagag
aaaaaggaaagaaacgataatatagacaaagttgaggaagaagttttagagcattttaaa
gatgaatatccagacaatcttgaagatattgatgaagttttatatacaattacaaaagaa
cagatgcgaaaaatgatcactgaagaaaaaataagagtagatggtagaggattagatgat
ataaggccaataacatgcgatgtcggtgttttacctcgtacacatggttcagctatattt
actcgtggtcagacgcaagttatgacagtggcaacattaggtcctcttggtgatatacag
attctcgatggtttgggtgacgaagaatccaagagatatatgcatcattataatttccct
ccttttagcgtaggcgaaacgaggccattaagaggtccaggaaggagagaaatagggcat
ggtgcgttagctgagagggcattagaacctatgataccttcagaggaggaatttccttac
acaatcagattggtctctgaagtgttaagctcaaatggttcaacttcacaagcaagtgta
tgcggaagcacattggctcttatggatgctggtgttccaattaaagcaccagttgcaggc
gttgcaatgggtcttattaaagagggcgatatagtatctatactgacagatatacaggga
atagaagactttcttggtgacatggatttcaaagttgcaggtactgaaaaagggataacg
gcaatacaaatggatataaaaatagctggcattgatcgcgatatcctttcgttagcttta
gaaaaggctcgaaaaggtaggttatttatattgaataagatgctagaaactataaaagag
ccaagaaaggaattatctccttatgctccaaggattataagcttaaacgtcgatcctgaa
aaaataagggatataatcggagcaggtggcaagacaataaacaaaataatagcagataca
ggtgttaaaatagacatagaggacgatggtagagtatttatatcatcaaccgatttaaaa
gctggcgagaaagctaaaatgatcattgaagcaataacaaaagatgtagaagtaggttca
atttatttaggaaaagtgacaagactggcttcatttggtgcttttgtagaaattgctcct
ggtaaagaaggattggtccacatatctaagttagataaaaaacatgtgaataaagttgaa
gatgtagtaaatattggcgatgaaattttggtaaaagtaacagagattgataaacaagga
cggattaatttatcgagaaaagatgctttgccagaagaaactaaaaatgacaaagaagtg
taa
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