Thermoanaerobacterium xylanolyticum: Thexy_1291
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Entry
Thexy_1291 CDS
T01505
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
txy
Thermoanaerobacterium xylanolyticum
Pathway
txy03030
DNA replication
txy03430
Mismatch repair
txy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
txy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Thexy_1291
03430 Mismatch repair
Thexy_1291
03440 Homologous recombination
Thexy_1291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
txy03032
]
Thexy_1291
03400 DNA repair and recombination proteins [BR:
txy03400
]
Thexy_1291
Enzymes [BR:
txy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Thexy_1291
DNA replication proteins [BR:
txy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Thexy_1291
DNA repair and recombination proteins [BR:
txy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Thexy_1291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
HHH_6
RNase_H_2
Rv2179c-like
tRNA_anti-codon
DEDDh_C
DUF655
HHH_3
Radical_SAM
tRNA_anti_2
DUF6282
Motif
Other DBs
NCBI-ProteinID:
AEF17324
UniProt:
F6BFI5
LinkDB
All DBs
Position
complement(1353794..1358026)
Genome browser
AA seq
1410 aa
AA seq
DB search
MLPSFLKEELGISDIKINKISLCLKERKLILSLPFNLKKDVSKLESLKSTIKSKIPLLSN
IEFEFIGTNNIDVYSVLNEYWDDIIKKASEKYPGTLSFIKSCHISIKDVEHVIIKASNEV
SFNFLKKNKIDMYISELIKEYYDLNVSFALDFDESIYDKLHEEIKKDEEILANNIIASPP
ENSQKIESDMDNNDSKVLLGKEINTESVKICDVFQEGDDVAIKGEIFSIDFREIKSKYLM
TFDITDTTSSFTVKAFLNGEKYSLIKDRLTIGSNVKVRGAVIYDKYERDLILNAKDIEMC
EKSFRVDSHLQKRVELHVHTQMSSMDGVSSAESLIKRASEWGHKAIAITDHAVLQAYPEA
QSAAKKYGIKVIYGIEGYLVNDGVPIVSGSTSATIDGSFVVFDIETTGLSSINDNIIEIG
AVKIKNFQIVDTFETFVNPQVHISKFITKLTGITDDMVKEYPSIEEILPKFLDFIKDSIL
VAHNANFDVTFIKTKARNLGMEVDNPVLDTLELSRHMYENLKNYKLDTVAQHLGVSLENH
HRAVDDAKATAEIFIKSINKLKENGIEKVNEINDYLKNKVDIKKMPTYHVIILVKNQKGL
RNLYELVSKSNLEYFHRNPRIPKSLLSQMREGLLIGSACEQGEVFRGLISNLDDDKLQEI
VSYYDYLEVQPLGNNEFLIDKGEVKNKEELIKINKRIYDLGKQFKKPVVATCDVHFLDPW
DNVYRKILMYGKGFKDADRQPPLYFRTTDEMMREFDYFDREIAKEIVIDNPNEIADSIED
VKPIPDGTFPPSIEGAEEELRKLTLNKAHEIYGEKLPDIVEKRLDKELNSIINNGYAVMY
IIAQKLVTKSLNDGYLVGSRGSVGSSFVATMSGITEVNPLPPHYICPHCKHSEFILDGSY
GSGVDMPDKNCPQCGTKMKKDGHDIPFEVFLGFEGDKEPDIDLNFSGDYQPIAHKYTEEI
FGTGHVFRAGTIGTLADKTAYGFVKKYFEEKNLTVHNAEIKRLVMGCTGAKRTTGQHPGG
VMVVPKDKDIYDFTPIQHPADAQDSDIITTHFDYHSISGRLLKLDILGHDDPTVIRMLED
LTGINAREIPLDDKKTMSLFTSVEALNINPEDINCTVGTLGLPEFGTKFVRQMLVDTKPT
TFAELVRISGLSHGTDVWLNNAQDIIKEGKATLKEVISTRDDIMLFLISKGLDKKLSFKI
MESVRKGKGIKEEEIEEMKKHNVPDWFIQSCQKIKYMFPKAHAVAYVIMAFRIAYFKVHH
PEAFYATYFTVRADEFNLDMMDSLEKIKENIRLIESKSNNATAKEKSLLTILEVGLEMYL
RGLKFTNIDLYKSDAVKFLITKDGILPPLNSLEGIGKQAAKIIAEEREKGKFLSIEDLRN
RTRISKTVIDILKQHGCLQDIPESNQLSLF
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgctaccttcttttcttaaagaggaattaggtataagcgatataaaaataaataagata
agtttatgtctaaaggaaagaaaacttatactgtctttgcccttcaatttaaaaaaagac
gtttcaaaattagaatctttaaaatctactattaaatcaaaaatccctctactttcaaat
atagaatttgaatttataggcacaaataacattgatgtgtattcagttttaaatgagtat
tgggatgatatcataaaaaaagccagtgaaaaatatcctggtactttaagctttataaaa
tcatgtcatatatctattaaagatgtggaacatgtaatcataaaggcatcaaatgaagta
tcttttaattttcttaagaaaaacaagatcgatatgtacattagcgaattgataaaagaa
tattatgatctaaacgtaagttttgcattagattttgatgaatcaatatatgacaaactt
catgaagaaatcaaaaaggacgaggaaattttggcaaataacatcattgcaagtcctcca
gaaaacagccaaaaaatcgaaagtgatatggataataatgacagtaaagtattgcttgga
aaagaaataaatacagaaagtgtaaagatctgcgatgtatttcaagaaggcgatgatgtt
gcaataaaaggtgaaattttttcaatagatttccgcgaaataaaatctaaatatctgatg
acttttgatattacagatactacgtcttcatttacagttaaggcatttttaaatggagaa
aagtacagtttaattaaagacagattaacaataggtagcaatgtaaaagtgcgtggtgct
gttatttacgataaatatgaaagagatctaatattgaacgctaaagacatagagatgtgc
gagaaatctttcagagtagattctcatctacaaaagagagtagagttgcatgtacacaca
caaatgagcagcatggatggagtaagctctgcagagtctttaataaaaagagcatcagag
tgggggcacaaagcaattgcaataacagatcatgctgtattgcaggcttatcccgaagct
caaagtgctgcgaaaaaatatggtattaaagtaatctacggtatagaaggttatctcgtc
aatgatggtgttccaatcgtcagtggaagtacatctgcgactattgacggcagctttgtt
gtatttgacattgaaaccacaggtctttcaagtattaatgacaacattatcgaaattgga
gctgtcaagataaaaaattttcaaatagtagatacatttgagacttttgtaaatccacaa
gttcacatatcaaaatttataacaaaattgactggcataacagatgatatggttaaagag
tacccatctatcgaagaaattttgcctaaatttttggactttataaaagattctattctt
gtagcacataatgcaaactttgatgtgacttttataaagacaaaagccagaaatcttggt
atggaagtggataatcctgttttggacactttagaattaagtagacatatgtatgaaaat
ctaaaaaattacaagctggatactgtagcgcagcatcttggtgtgtcacttgaaaatcat
catagagccgtagacgatgctaaggcaactgctgaaatttttattaaaagcatcaataag
ttaaaagaaaacggaatagaaaaagtaaatgaaataaatgattatttaaaaaataaggtt
gacataaaaaaaatgcctacatatcatgtaattatacttgttaagaatcaaaagggcttg
agaaatctctatgaattggtatcaaagtcaaatttagagtattttcatagaaatccgaga
attcctaaaagtttgttgtcacaaatgagagaaggattgttaattggttccgcttgtgaa
caaggtgaagtatttagaggattaatatcaaatcttgatgacgataaattgcaagaaatc
gtcagttattatgattatttagaagtgcaacctttaggaaataatgaatttttaattgac
aaaggcgaggtaaaaaacaaagaagaattgattaagataaataaaagaatttatgattta
ggcaaacaattcaaaaagccggttgttgcaacgtgtgatgtccactttttagatccttgg
gataatgtgtatagaaaaatactcatgtatggaaagggatttaaagatgctgatagacaa
ccaccactttattttagaacaactgatgaaatgatgcgagaatttgattattttgataga
gagattgcaaaagagatcgtcatagacaatcctaatgaaatagcagattctatagaagac
gttaaaccgataccagatggaacatttcctccgtcaatagaaggtgcagaagaagagctt
agaaaattgacattaaacaaagctcatgaaatatatggtgaaaaattgccagatatagtt
gaaaaaaggttagacaaagaactaaattctatcataaataatggatatgctgtcatgtat
attatagctcaaaaactagtgacaaaatcattgaatgatggttatttagttggttcaagg
ggctcagtcggttcatcgtttgtggcaacgatgagtggaataaccgaggttaatccgttg
ccacctcattatatctgtcctcattgcaagcattcggaatttatattagatggaagttac
ggttctggtgtagatatgcctgataaaaattgtccacaatgtggaacaaaaatgaaaaaa
gatgggcatgatattccatttgaagtttttcttggatttgaaggggacaaagaaccagat
atagatttaaacttttcaggagattatcagccgatagcgcataaatacacagaagaaata
tttggaacaggtcacgtctttagagctggaactattggtacattggctgataaaacagca
tacggctttgtaaaaaagtattttgaagaaaaaaatttaacagttcataatgcagaaatc
aaaaggctagtcatgggttgtactggtgccaaaaggactacagggcaacatccaggtggt
gttatggttgttcctaaagacaaagatatttacgattttacacctatacaacatcctgca
gatgcacaagattcagacataataacaacgcactttgattatcactctataagcggaaga
ctgcttaagcttgatatacttggtcatgatgatcctactgtaataagaatgctggaggat
ttaacaggaatcaatgccagagaaataccattagatgacaaaaagacaatgagccttttt
acaagcgtagaagcgcttaacataaatccagaagatataaattgcacagtaggtacttta
gggctgcctgaatttggaacgaaatttgtaagacaaatgctggttgatacaaagccgaca
acttttgcagaacttgtgagaataagtggactttcgcatggtacggatgtttggcttaat
aatgcgcaggacataataaaagaaggcaaagccacccttaaagaagtaatctctacaaga
gatgatataatgttatttcttattagtaaagggcttgacaagaaactgtcttttaagata
atggaaagtgttagaaaagggaagggcatcaaagaggaagaaatagaagaaatgaaaaag
cataatgtgcctgattggtttatccagtcatgccaaaaaattaagtacatgtttcctaaa
gcccatgcagttgcttatgtcataatggcttttaggatagcttattttaaagtgcatcat
cctgaggctttttatgctacctattttactgttagagctgatgagtttaacttagatatg
atggattctttagaaaaaatcaaagaaaatataaggctaattgaatcaaagagcaataat
gctacagcaaaagagaaaagcttattgacaatattagaggttggccttgaaatgtacctt
agaggtctaaagttcacaaatattgatttatataaatctgatgcagttaaatttttaatt
acaaaagatggcatattgcctccgttgaactcattggaaggtataggcaagcaagcagcg
aagataatagctgaagagagagaaaaaggcaaatttttatcaatagaagacttgagaaat
agaacgagaattagtaaaacggttattgatatattaaagcagcatggttgtctacaggat
attcctgaatcaaatcaattaagtttattttaa
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integrated database retrieval system
