Thermoanaerobacterium xylanolyticum: Thexy_1339
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Entry
Thexy_1339 CDS
T01505
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
txy
Thermoanaerobacterium xylanolyticum
Brite
KEGG Orthology (KO) [BR:
txy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
txy03032
]
Thexy_1339
03400 DNA repair and recombination proteins [BR:
txy03400
]
Thexy_1339
Enzymes [BR:
txy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Thexy_1339
DNA replication proteins [BR:
txy03032
]
Prokaryotic type
DNA Topoisomerases
Thexy_1339
DNA repair and recombination proteins [BR:
txy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Thexy_1339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Zn_ribbon_RPB9
DNA_ligase_ZBD
Auto_anti-p27
Lar_restr_allev
Mnd1
Toprim_4
DUF4364
Ogr_Delta
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
AEF17372
UniProt:
F6BG27
LinkDB
All DBs
Position
complement(1396413..1398470)
Genome browser
AA seq
685 aa
AA seq
DB search
MEKSLVIVESPSKAKTIHKYLGKNYKVEASMGHIRDLPKSQLGIDIEKNFEPKYITIRGK
GPIIEKLKKEAKNASKIYLATDPDREGEAISWHLASLLNIDINEKCRIEFHEITKNAIQN
AIKNPREINMNLVDAQQARRILDRLVGYNISPLLWKKIKRGLSAGRVQSVATRLICDREK
EIEDFKPEEYWSISAYLYKEKKTQSFEAKFYGTKDGKVELKNENDVNEIVKDLTDDYVVE
NVKIGTKKRNPSPPFITSTMQQEASKTLGFTAKKTMMIAQQLYEGVEIKGEGSLGLITYM
RTDSTRVSDEAKKAAYEYILQKYGKEYANPNATYAKKGGNIQDAHEAIRPTYIDLDPEKI
KDSLKPDQYKLYKLIWSRFLASQMSPALYDTMNVDIINKNYVFKASGSKIKFSGFMAVYT
DDDENENEDKMLPMLNSGDFLKLKELKPEQHFTQPPARYTEATLIKELEEKGIGRPSTYA
PIISTLLERGYVIKEKKNLKPTELGFIVTDVMKEFFPDIVDVKFTAQMEEQLDRIEEGIE
KWCDVIDEFYNGFNASLKIAEEQMKDIEIKDEETDIKCEFCGRNMVIKYGRYGKFLACPG
FPECKNTKPLYEEIGVTCPKCGGKIIIKKSKKGKVYYACENSSNCGTMFWDRPISETCPK
CGALLVEKHSKGRKIIKCSNCDYVK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatctttggtaatagtagaatcgccatctaaggctaaaacaatacataaatat
ttaggcaaaaattataaggtcgaagcatctatggggcatataagggatttgcctaaaagt
cagcttgggatagatattgaaaaaaattttgaaccaaaatacataacgattcgcggaaaa
ggacctataatcgagaagttaaaaaaagaggcaaaaaatgcatcgaaaatttaccttgca
acggacccggatagggaaggggaagctatatcatggcatttggcaagtttattaaatatt
gatattaatgaaaaatgtaggatagagtttcatgagataacaaaaaatgccatacagaat
gccattaaaaatccgagagaaataaatatgaatttagttgatgcacagcaggctaggcga
attttagatagacttgtaggttataatataagtccactgctctggaaaaaaataaagaga
ggcttgagtgcaggtagagttcaatcggtagcaacaagattgatttgtgatagagaaaag
gaaattgaggattttaaaccggaggaatactggagcatatcggcatatttgtataaagaa
aaaaagacacaatcttttgaagcaaaattttatggtacaaaagatggaaaagtagagtta
aaaaatgagaatgatgtaaatgaaatagtaaaagatttgacagatgattatgtagtagaa
aatgtcaaaataggtacaaaaaagagaaatccttcacctcctttcataacaagtacaatg
caacaagaagcctcaaaaacattgggttttactgcgaaaaagacgatgatgattgcacag
caactttatgaaggtgtagaaataaagggtgaaggcagccttggattaataacttatatg
agaacagactcaacaagagtttcagatgaagctaaaaaagcagcctatgagtatatattg
cagaaatacggaaaggaatatgcaaatccaaatgctacatatgcaaaaaagggagggaat
attcaagacgctcatgaagctataagacctacatacatagatttagaccctgagaaaatt
aaggattctttaaagccagatcaatataaattgtataaattgatttggagtagatttttg
gcaagtcaaatgtcaccggccttatatgacacgatgaatgttgatattattaataaaaat
tacgtgtttaaggcaagtggctctaaaattaagttttctggttttatggcggtttacaca
gatgatgatgaaaatgaaaatgaagataagatgcttccaatgcttaatagcggagatttt
ttgaaattaaaagaattaaagccagagcagcattttacgcagccacctgcaagatatact
gaagctacactgataaaagagcttgaggaaaaaggtataggaaggccaagcacttacgct
cctataatatctacattattagaacgaggatatgtgataaaagaaaagaaaaatcttaaa
cctacggaattggggtttattgtaacagatgtaatgaaagaattctttccagacatagta
gatgtaaaatttacggcgcaaatggaagagcagcttgacagaatagaagaaggaattgaa
aagtggtgtgatgtcatcgatgaattttacaatggttttaatgcttcactaaagatagca
gaagaacaaatgaaagatattgaaataaaagatgaagaaactgatattaaatgcgaattc
tgcggcagaaatatggttataaagtacggccgttatggtaaatttttagcttgtcctgga
tttccggagtgtaaaaatactaaaccattatacgaagaaattggtgttacatgtcctaaa
tgtggaggtaaaatcattattaaaaaaagcaaaaaaggaaaagtttattatgcgtgtgaa
aattcttccaattgtggcactatgttttgggataggcctatatcagaaacatgtcctaaa
tgtggggccttgcttgttgagaagcattcaaaagggcgaaagattattaaatgcagtaat
tgtgattacgtaaagtaa
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